Gene
Gene Model ID | pfu_aug1.0_10345.1_39033 |
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Locus | scaffold10345.1 : 10216 ... 13875 : - |
To GenomeBrowser | scaffold10345.1:10216..13875 |
Genes list of scaffold | scaffold10345.1 |
Synonym | pfu_aug2.0_671.1_04467 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to MgC1q66. 86 bits, 2e-15 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_10345.1_39033.t1 | 1 | 1 | C1q | 32 | 153 | 3.5e-22 | 78.7 | 3.1e-26 | 4.5e-22 | 78.3 |
Transcript
Transcript ID | pfu_aug1.0_10345.1_39033.t1 |
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Definition | - |
>pfu_aug1.0_10345.1_39033.t1 atgtttatagatatgatattactatgtttttacataaaaaagtacacaattgttcatctgttttcagtcaatacttttac ccagcatatggtggctttcacagcttgccattcaccaggttctcttatcggtccccgacaaacagtcatctacgatcaca ttataacaaacatagggaatgcttacgatgtcagggatggagagttcaacgtgccatacgatggtctctatacattttct gtcacaggaatggcatacacagaaagtgatatgtatcttacattagtgaaaaatggcgtctacgttcatcagttgtatag taattctggatatgccgactcctctacctataccatgaatctttacctacaagccggtgatgcagtttgggtagtcaata gcggatctagtgatcgacttcatgctaatgattataactgcttctcggggatgcttgtcaaggagaagtaa |
Protein
Protein ID | pfu_aug1.0_10345.1_39033.t1 |
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Definition | - |
>pfu_aug1.0_10345.1_39033.t1 MFIDMILLCFYIKKYTIVHLFSVNTFTQHMVAFTACHSPGSLIGPRQTVIYDHIITNIGNAYDVRDGEFNVPYDGLYTFS VTGMAYTESDMYLTLVKNGVYVHQLYSNSGYADSSTYTMNLYLQAGDAVWVVNSGSSDRLHANDYNCFSGMLVKEK |