Gene
| Gene Model ID | pfu_aug1.0_10373.1_53533 |
|---|---|
| Locus | scaffold10373.1 : 8316 ... 16225 : + |
| To GenomeBrowser | scaffold10373.1:8316..16225 |
| Genes list of scaffold | scaffold10373.1 |
| Synonym | pfu_aug2.0_594.1_14363 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10373.1_53533.t1 | 1 | 1 | fn3 | 181 | 255 | 4.9e-08 | 32.9 | 7.1e-12 | 1.1e-07 | 31.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10373.1_53533.t1 | gi|321460535|gb|EFX71576.1| | hypothetical protein DAPPUDRAFT_308786 [Daphnia pulex] | 7.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10373.1_53533.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10373.1_53533.t1 atggctgaaggtggactatttgatttggacgtacagacaatcacgtcaaaatggaatgacacgattacacatttcgcaga gaagtactttcgtgtaattcttaagagagaaattgaccctgcaagattattacaatcaataaaccattctggttggaaac caaaatctcacgaaaaagaacaaattaatgaagtaacacgtcatggctataaagtccttgacgcatctgttctctacact ttaatacgaaacgttacaagattaagtttaccaagcagaggctggggaaaggaaccatcttataatcacgtgacagaatc cgatgacatcgaaagaatccgagcgctcagaaatgacgttattcacaagaaaaatctgtctcatttgttctacctcgagg cgttcaaaactttatcgagtattttagaacgggcgttgtcaagagctcctagtgttccatttcaagatgatttgaaatgc ctcaaagaattggtctctactttagaaaagtccactgcgccaagcaagccgaaggatggaggttctactgcaaactctat caatattagttgggttcaccgatcagatccaaacatagactatgttgctggatatgagatttattataagagagcatatg gatcagaccgtactaatagatggctccgtgtatgcaccaaggacagatgtccaaagtttaccataagaagactcaaatca cacactgaatatgtcttcaaagtgagagccttgtataatcaaggaggcaatgacactgcaggaccatttggtcaggaaag tgattgtatcaagacaaaagagaccccagccaataaaataaaacagctctgtaccaagctactagatacaatggacgacg gaagcagtatccagtaccacgaagtgttgttagaagaaaaggtggttaaaaacttcctacgaattaggagattagatcct caggttgacattggacagaattcttgcctggacagtaagacattattattagttgggacatcatcctcagagaaatctgc tgtcataaatgcagtcctcaatttcatgtatgatgtctcatttcacgacgagttcagacttctggttgatcgaggagaat ccgcgacatccggagcactttgcattagtcgatatgtctttcctcgacttcacggtgcaaagaccaaattctgtatcaac atcgtcgatataccttgcctgaccggtgacaagaagagggattcagaaattactcagcttgtgaaactttactacgatta ttgcaaagattcatcctcggaaaccattgacttaattgggtatgttatgccagagagtcacatgcaatctgttgaacctg gccaagagtatattttaggatgtgttcttgacatttttgggtcggacttgaagagcatcatacacataattcagacttct tcaagtccgaatgaaagtcaacgcagtcccgttgtcgaggcactgcatgatcatcatgtcttttgcagacagtttagatt caataatacatggttaagatctaataatgaagacattgcaaataattattgggaaatgagtgcacattcgtttcacgatc ttaatgtccatttacaaaaaactcgaccgaagacatttgtgcaatcggaagaagctctgaaaatgctcaacataatgaaa catatgttctggtcgtctcatcctttcttgcgatcatgtatcaacaaattaatcagcttaggtgaagagaagaagatgat gcaaaatttcgcggaagcaggagcgaatgttgtccctattcttgaatgttatgttgaagagtcatgggatgataataacg atagtttttgctttaattgtaccatttgcaaggtttcatgtttatacccatgctatgaagacagtactgacagtaatcat cttggaattaaaaacagaatcgacgaaacttgtcaaatgtgcggctgtcctttagctaaagacaacgaaagtagtcacac atttgaaaggaaattttatcgcttagagctgaagaaagagttgaaaaccttaggagaggttcaagaaaagtacaaaattg aggaaaccagaaatcttcatcagcatataacgaaacttaaaagtgatcatggagcttttctacatagactgatgcatgaa atagataagaaatttaaactctttcaggaaaagtcctcaagaagtcatgtagttccaattgaaaatgcgatagattgtct cgttcaggaagagcagtttgaaatctctgttggtactaatgagagaattcgcttgtactctatacttaaacgcaaagaaa tggtatcagattaa |
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Protein
| Protein ID | pfu_aug1.0_10373.1_53533.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10373.1_53533.t1 MAEGGLFDLDVQTITSKWNDTITHFAEKYFRVILKREIDPARLLQSINHSGWKPKSHEKEQINEVTRHGYKVLDASVLYT LIRNVTRLSLPSRGWGKEPSYNHVTESDDIERIRALRNDVIHKKNLSHLFYLEAFKTLSSILERALSRAPSVPFQDDLKC LKELVSTLEKSTAPSKPKDGGSTANSINISWVHRSDPNIDYVAGYEIYYKRAYGSDRTNRWLRVCTKDRCPKFTIRRLKS HTEYVFKVRALYNQGGNDTAGPFGQESDCIKTKETPANKIKQLCTKLLDTMDDGSSIQYHEVLLEEKVVKNFLRIRRLDP QVDIGQNSCLDSKTLLLVGTSSSEKSAVINAVLNFMYDVSFHDEFRLLVDRGESATSGALCISRYVFPRLHGAKTKFCIN IVDIPCLTGDKKRDSEITQLVKLYYDYCKDSSSETIDLIGYVMPESHMQSVEPGQEYILGCVLDIFGSDLKSIIHIIQTS SSPNESQRSPVVEALHDHHVFCRQFRFNNTWLRSNNEDIANNYWEMSAHSFHDLNVHLQKTRPKTFVQSEEALKMLNIMK HMFWSSHPFLRSCINKLISLGEEKKMMQNFAEAGANVVPILECYVEESWDDNNDSFCFNCTICKVSCLYPCYEDSTDSNH LGIKNRIDETCQMCGCPLAKDNESSHTFERKFYRLELKKELKTLGEVQEKYKIEETRNLHQHITKLKSDHGAFLHRLMHE IDKKFKLFQEKSSRSHVVPIENAIDCLVQEEQFEISVGTNERIRLYSILKRKEMVSD |
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