Gene
| Gene Model ID | pfu_aug1.0_10378.1_24733 |
|---|---|
| Locus | scaffold10378.1 : 12046 ... 29325 : + |
| To GenomeBrowser | scaffold10378.1:12046..29325 |
| Genes list of scaffold | scaffold10378.1 |
| Synonym | pfu_aug2.0_402.1_07465 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10378.1_24733.t1 | 2 | 1 | Ank_4 | 351 | 401 | 8.4e-13 | 48.4 | 3.3e-11 | 8.2e-08 | 32.5 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 1 | Ank_2 | 358 | 411 | 5.0e-18 | 65.2 | 5.9e-15 | 1.5e-11 | 44.5 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 1 | Ank | 358 | 373 | 9.4e-12 | 44.1 | 3.4e-05 | 0.083 | 12.7 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 1 | Ank_3 | 358 | 372 | 3.4e-07 | 29.8 | 0.0041 | 10.0 | 6.7 |
| pfu_aug1.0_10378.1_24733.t1 | 1 | 1 | Ank_5 | 363 | 421 | 7.6e-11 | 41.8 | 4.9e-13 | 1.2e-09 | 38.0 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 2 | Ank | 376 | 412 | 9.4e-12 | 44.1 | 3.3e-10 | 8.3e-07 | 28.5 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 2 | Ank_3 | 376 | 407 | 3.4e-07 | 29.8 | 1.3e-07 | 0.00031 | 20.6 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 2 | Ank_2 | 385 | 436 | 5.0e-18 | 65.2 | 1.3e-09 | 3.3e-06 | 27.3 |
| pfu_aug1.0_10378.1_24733.t1 | 2 | 2 | Ank_4 | 387 | 421 | 8.4e-13 | 48.4 | 6.2e-08 | 0.00015 | 22.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10378.1_24733.t1 | gi|291239791|ref|XP_002739805.1| | PREDICTED: M-phase phosphoprotein 8-like isoform X1 [Saccoglossus kowalevskii] | 9.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10378.1_24733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10378.1_24733.t1 atgtctggaccttgtagaagacttcaaaataaaaaggaggaagagaaaaagaaaagagcagaagagagaaaaagaaagaa ggctatcatggagggtaaaatgatgtccgatgatgattcgtcccgcgactccagagagagcatagacccggacactgata attaccactctacgttcaaaaatggtttctggaaggatcttgagctgggtaaactgaaccttttcacaacagacatgtac tcccgtgtcaaaggtgcgggaggtggaagagcgtctaggccaacttgtcttaaagacacggtcaaaatacagaaagatca ggaaaaagaaaaacctaaacgaaaaaagtcggatgctaatgataaaaaggatccgaaaagagtaaaggagagagataagg agcagagcagtaagaaattgaccaaagatgtaaagaaaaagcattccagggtgattatagaaacggacgaggacagtagt agcgatatggaagtaaagagttcaagaagttcattctccggtgacgagaacacgcgtgacagctatgtggtggagagaca agatccgcaggatgaaatcacagatctgacatcgttatccacagaacgcatgcctgttctcaaaataaagaaacttagag agtcagatcaagatagttctgaaggtaagatttaccttatcatgtttngtgtagaattaaccaaccagtccagtcctagt gctaaagtacctaaacaacaaagagactctgatgcctctagggacagtggtttagggtccataagtagtcctacaggact agagttagactttagtaagtcacgtatcaattcggaccaggagaaagccaaatccgtgaagaaaactactagcacggcac cctgcacacagccactggatgaagtgtggagtggatctctgttaccattactaccagaaagtacaaagacacaagaaaga ggggcggatctaagttttgatatagagcttgatgacatagacctggatcaattggataaagaactgcctgatgaatgtat cgatgccatagtgatcactgacagctatgatgacatcgcagagttactggttaacaatggtgcagatgttaatgctcagc agaaaaacggaaccacctctctaatgctggcatgtgaacatgctgtcaaaagaggtcacaagcagatagttaaatttttg ctcgaatatggagcaaatttctcggctcaaaacaattcaggatttaccgcagtaacatatgccaagatgctgaggttaat ggagattgaagatattattgttgaccatatatctagattaaccaaagagtttgacaagcaagtgctgattacgttaaaca acactgccaaaatcactagtgctctgtttcctttacaagtcttcccactgtgtgagggtgaaaagtttgtcatcaacttt aaacatgatttccagcctatcacaccaggtattggtcacctgttgtttgtatcacatgccagaatcacggccactgactg taagtgtaggttctacgggccttgtgccgtcacgtcggtaacactgaatggggcacctcaaccacagctaacagagcaat attctttgaaaagtttatcttag |
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Protein
| Protein ID | pfu_aug1.0_10378.1_24733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10378.1_24733.t1 MSGPCRRLQNKKEEEKKKRAEERKRKKAIMEGKMMSDDDSSRDSRESIDPDTDNYHSTFKNGFWKDLELGKLNLFTTDMY SRVKGAGGGRASRPTCLKDTVKIQKDQEKEKPKRKKSDANDKKDPKRVKERDKEQSSKKLTKDVKKKHSRVIIETDEDSS SDMEVKSSRSSFSGDENTRDSYVVERQDPQDEITDLTSLSTERMPVLKIKKLRESDQDSSEGKIYLIMFXVELTNQSSPS AKVPKQQRDSDASRDSGLGSISSPTGLELDFSKSRINSDQEKAKSVKKTTSTAPCTQPLDEVWSGSLLPLLPESTKTQER GADLSFDIELDDIDLDQLDKELPDECIDAIVITDSYDDIAELLVNNGADVNAQQKNGTTSLMLACEHAVKRGHKQIVKFL LEYGANFSAQNNSGFTAVTYAKMLRLMEIEDIIVDHISRLTKEFDKQVLITLNNTAKITSALFPLQVFPLCEGEKFVINF KHDFQPITPGIGHLLFVSHARITATDCKCRFYGPCAVTSVTLNGAPQPQLTEQYSLKSLS |
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