Gene
| Gene Model ID | pfu_aug1.0_10400.1_24738 |
|---|---|
| Locus | scaffold10400.1 : 21790 ... 25355 : - |
| To GenomeBrowser | scaffold10400.1:21790..25355 |
| Genes list of scaffold | scaffold10400.1 |
| Synonym | pfu_aug2.0_25.1_16736 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10400.1_24738.t1 | 7 | 1 | LRR_8 | 48 | 102 | 3.6e-19 | 68.2 | 1.6e-09 | 3.3e-06 | 26.7 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 1 | LRR_4 | 49 | 74 | 3.6e-13 | 48.7 | 0.028 | 58.0 | 3.4 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 1 | LRR_1 | 49 | 62 | 5.3e-07 | 28.7 | 0.0022 | 4.6 | 7.6 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 2 | LRR_4 | 70 | 112 | 3.6e-13 | 48.7 | 4.1e-05 | 0.087 | 12.4 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 2 | LRR_1 | 70 | 91 | 5.3e-07 | 28.7 | 0.1 | 210.0 | 2.5 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 3 | LRR_1 | 93 | 113 | 5.3e-07 | 28.7 | 0.015 | 31.0 | 5.1 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 2 | LRR_8 | 151 | 209 | 3.6e-19 | 68.2 | 5.4e-06 | 0.012 | 15.4 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 3 | LRR_4 | 152 | 218 | 3.6e-13 | 48.7 | 0.00026 | 0.54 | 9.9 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 4 | LRR_1 | 152 | 173 | 5.3e-07 | 28.7 | 0.29 | 620.0 | 1.1 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 5 | LRR_1 | 202 | 210 | 5.3e-07 | 28.7 | 0.27 | 570.0 | 1.2 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 4 | LRR_4 | 269 | 309 | 3.6e-13 | 48.7 | 0.014 | 29.0 | 4.4 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 6 | LRR_1 | 269 | 280 | 5.3e-07 | 28.7 | 0.9 | 1900.0 | -0.4 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 3 | LRR_8 | 284 | 299 | 3.6e-19 | 68.2 | 0.26 | 550.0 | 0.4 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 4 | LRR_8 | 294 | 351 | 3.6e-19 | 68.2 | 0.0004 | 0.85 | 9.4 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 5 | LRR_8 | 318 | 351 | 3.6e-19 | 68.2 | 0.00011 | 0.23 | 11.2 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 5 | LRR_4 | 318 | 351 | 3.6e-13 | 48.7 | 0.0023 | 4.9 | 6.8 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 6 | LRR_4 | 340 | 380 | 3.6e-13 | 48.7 | 0.0006 | 1.3 | 8.7 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 7 | LRR_1 | 340 | 352 | 5.3e-07 | 28.7 | 0.0042 | 8.8 | 6.7 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 6 | LRR_8 | 370 | 427 | 3.6e-19 | 68.2 | 5.0e-12 | 1.1e-08 | 34.7 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 7 | LRR_4 | 370 | 406 | 3.6e-13 | 48.7 | 5.8e-07 | 0.0012 | 18.3 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 8 | LRR_1 | 370 | 391 | 5.3e-07 | 28.7 | 0.0004 | 0.84 | 9.9 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 8 | LRR_4 | 393 | 431 | 3.6e-13 | 48.7 | 2.5e-10 | 5.2e-07 | 29.1 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 9 | LRR_1 | 393 | 414 | 5.3e-07 | 28.7 | 0.0019 | 4.0 | 7.8 |
| pfu_aug1.0_10400.1_24738.t1 | 9 | 9 | LRR_4 | 416 | 461 | 3.6e-13 | 48.7 | 0.00012 | 0.26 | 10.9 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 10 | LRR_1 | 416 | 433 | 5.3e-07 | 28.7 | 0.0006 | 1.3 | 9.3 |
| pfu_aug1.0_10400.1_24738.t1 | 11 | 11 | LRR_1 | 446 | 457 | 5.3e-07 | 28.7 | 0.94 | 2000.0 | -0.4 |
| pfu_aug1.0_10400.1_24738.t1 | 1 | 1 | TIR | 578 | 683 | 1.2e-16 | 60.3 | 1.6e-19 | 3.4e-16 | 58.9 |
| pfu_aug1.0_10400.1_24738.t1 | 1 | 1 | TIR_2 | 578 | 676 | 2.4e-09 | 37.2 | 2.2e-12 | 4.7e-09 | 36.3 |
| pfu_aug1.0_10400.1_24738.t1 | 7 | 7 | LRR_8 | 667 | 698 | 3.6e-19 | 68.2 | 0.98 | 2100.0 | -1.5 |
Transcript
| Transcript ID | pfu_aug1.0_10400.1_24738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10400.1_24738.t1 atgattattaaattatcatcagtgatgcttccagccaaagaaatgctgaaaaaagaattgcaaagtaaatataacaagtt aaaggcagattgctcgaggagacagttgtcagaaattccaagattcgatcacagcgtagttgatattgatcttagtggaa atgaaaacctttccaaaattcctgcaataaactatctgccatctcgactcatcagattagatgcaacgttgtgtaatcta cagcatatagaacttggtgcattacaaggactgaaaaatctttattatctagacatatcatggaatcctgagcttaccct ggacgttctatcgaacataacaaatgatttgattggttcaaatatcaaaacattgaaatttaatgcaatacagtgttccg aaggggcaggtaaaaccctcaagttcgaacacttgtgtcgtttacaaaattcctcacttcaggaaatagaactagctaaa aatagaatagatatgatagaacagcacgttcttcgtagtctaccatcttctttgaaagatatttcagcgggtatcaatag actcagatttggatcctacatgttagaaatcagttccttggaaaatcttcgatttctaaatctgagcgatatgtatgcga tgaataatccattcgaacacccttggagtgtaaaatgtatggacaagaaaactgaaacatccgtcggaacgtccagaatg ttgatgccctgttcaaagtcgaatattgatgaaaatgaatctgaacaactccctgatagtaaagtcattatgtatatgcc ttccaaattagaaactctcgtaatgaataattgtatcattcgagtaacaaaaaaattgaataagctagttttgaaatatc cttcacttaagagagtgtttgctaacaataactttttacgatatttgaatggatatgatcattccttaagactcgaggag gcctacttatccaacagttttatagaagaaactgatgatttattcttcagaacgagtaatttaactatattagatctgtc atataacttactgggtgaacattttaccaaacaacgttctgctgaacaattacaaagtcaaaaatttctcaaaattctga atttgtcttataacagacttcattattcgccatttgatcttttcaaaggtttgatacaactagaagtgctaaatgtgagt gggacggaactgaagaaaatacactttacctttagttctttgataaatctcaaaacctttgatctatccgacaataggat tcgaacattgtccgattctaacatgcgggaattcgatgatttaagtacgaaaacattattatttatcaacttgacaggta atgatattatatgtacttgtgagaccttaacatccttaaaatggatgcaaaataagcaacataaagatagtaaaataaat tttacaaacttcgaagagtacacatgctctttcatcaattctacgcagaaaagttttcgtcatatttctgaaataataaa ggatcttgagaaaacatgctctaccaaaagcataattttcatcatcagtggaattttgatacttttatttattattatcg tcatatcggggattttgtatcgatatcgatggaaattaagatacatttatcacatgacgcgacgaagtcttagaggctac tttttgcttcaaaacgacgacgggagcgaacggaaatgtttcgaatttgacgtatttataagttatgctgatgaagataa taactttgcatatacaactttaaaatcgaaagtacaaagcaaaaatccagcagcgaaactatgttatcataaagaacagt ttataccaggaagtgacgtagctgaaaacattgtcaatgcagtaaactgtagcagaaaaaccgtctgcgtgttgtctgag tattttcttgcatcagagtggtgtatctatgaatttaagatggccaatttggagaaaatctacaaacgtggagatcaaaa ttcacttattatcctgatgcttggaagcatcaatacagaaagcgtaccagcagacataatgacctacctgaattccaggt cttacctagaagttcccagcaatattgacgagtttgacgtttactgggaccacatcattagtgttatcattgatgaataa |
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Protein
| Protein ID | pfu_aug1.0_10400.1_24738.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10400.1_24738.t1 MIIKLSSVMLPAKEMLKKELQSKYNKLKADCSRRQLSEIPRFDHSVVDIDLSGNENLSKIPAINYLPSRLIRLDATLCNL QHIELGALQGLKNLYYLDISWNPELTLDVLSNITNDLIGSNIKTLKFNAIQCSEGAGKTLKFEHLCRLQNSSLQEIELAK NRIDMIEQHVLRSLPSSLKDISAGINRLRFGSYMLEISSLENLRFLNLSDMYAMNNPFEHPWSVKCMDKKTETSVGTSRM LMPCSKSNIDENESEQLPDSKVIMYMPSKLETLVMNNCIIRVTKKLNKLVLKYPSLKRVFANNNFLRYLNGYDHSLRLEE AYLSNSFIEETDDLFFRTSNLTILDLSYNLLGEHFTKQRSAEQLQSQKFLKILNLSYNRLHYSPFDLFKGLIQLEVLNVS GTELKKIHFTFSSLINLKTFDLSDNRIRTLSDSNMREFDDLSTKTLLFINLTGNDIICTCETLTSLKWMQNKQHKDSKIN FTNFEEYTCSFINSTQKSFRHISEIIKDLEKTCSTKSIIFIISGILILLFIIIVISGILYRYRWKLRYIYHMTRRSLRGY FLLQNDDGSERKCFEFDVFISYADEDNNFAYTTLKSKVQSKNPAAKLCYHKEQFIPGSDVAENIVNAVNCSRKTVCVLSE YFLASEWCIYEFKMANLEKIYKRGDQNSLIILMLGSINTESVPADIMTYLNSRSYLEVPSNIDEFDVYWDHIISVIIDE |
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