Gene
| Gene Model ID | pfu_aug1.0_10416.1_02912 |
|---|---|
| Locus | scaffold10416.1 : 5506 ... 13450 : + |
| To GenomeBrowser | scaffold10416.1:5506..13450 |
| Genes list of scaffold | scaffold10416.1 |
| Synonym | pfu_aug2.0_599.1_30963 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10416.1_02912.t1 | 2 | 1 | DUF716 | 20 | 29 | 4.3e-30 | 103.9 | 0.34 | 5000.0 | -3.2 |
| pfu_aug1.0_10416.1_02912.t1 | 2 | 2 | DUF716 | 117 | 238 | 4.3e-30 | 103.9 | 2.9e-34 | 4.3e-30 | 103.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10416.1_02912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10416.1_02912.t1 atggggtcgttcggaggccacgcccttccggggtcattcttcatcttatttgctttgtggtggacagtacagatgtttaa tcgttactttcaatctctgcgtcgtaacacccgcttccggtcatcagtgacgtatccgtgcacttgtctgtgtggaaagt tgcaagaatggccaatagaagccgtcgtcaaactctttttcgtgtcgcttggattcaccatggaaattattaccggatcc agcgacggcaaatttacagcattgggaaatggtcaacatgcgaccatgtttttcttcttcggactgtcgggttgcatcga ccttcttctgtacttcagagcccccttgcctaaagacttagactatatcataacacttctctcagtgggaatcgagggat tattgtttcattttcatctgcacggaagaaatgaattagacgtgcttcttcatacactccttatttataccataattctc aatatgatggctatatgctttgagatccgttaccggaacagtttgcttgctgccctcggaagagcttattgcttcttctt gcagggaacatggttctggcaggtcggtttcattctgtacaatcccaacccaaacgcagagaagtggaaaggtgacgatc acgacgaactgatgatcgccaccatgttttttgcctggcacgtgggcgccgtgttcctaataatgctcgcaataggtggg gttattgcctgtttccacaaacgttttaatgggtacgtagaagaggaaatagcaatgaagcgccttattcacacaggttc aaacgggcaaactcttatttctatgaatgatgatgatagcgatagcgacatagaattccagaaacctgtcacaaagtga |
|
Protein
| Protein ID | pfu_aug1.0_10416.1_02912.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10416.1_02912.t1 MGSFGGHALPGSFFILFALWWTVQMFNRYFQSLRRNTRFRSSVTYPCTCLCGKLQEWPIEAVVKLFFVSLGFTMEIITGS SDGKFTALGNGQHATMFFFFGLSGCIDLLLYFRAPLPKDLDYIITLLSVGIEGLLFHFHLHGRNELDVLLHTLLIYTIIL NMMAICFEIRYRNSLLAALGRAYCFFLQGTWFWQVGFILYNPNPNAEKWKGDDHDELMIATMFFAWHVGAVFLIMLAIGG VIACFHKRFNGYVEEEIAMKRLIHTGSNGQTLISMNDDDSDSDIEFQKPVTK |
|