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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10416.1_02913
Locus scaffold10416.1 : 16314 ... 23050 : -
To GenomeBrowser scaffold10416.1:16314..23050
Genes list of scaffold scaffold10416.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10416.1_02913.t1 1 1 Amidase 1 61 2.2e-25 89.4 1.5e-29 2.3e-25 89.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10416.1_02913.t1 gi|300676867|gb|ADK26739.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Zonotrichia albicollis] 1.0e-22

Transcript
Transcript IDpfu_aug1.0_10416.1_02913.t1
Definition-
>pfu_aug1.0_10416.1_02913.t1
agctcttggttcagatacaggaggttcaacacggaatcctgcggcatactgtggtgtagtgggtcttaaatccacgtacg
gtttgttgtcaaggcatggtctgatacccctggttaactccttggacgtccctggaattcttacaaaaactgtcgatgat
gctactatactactaagtaagattcacaggtcatag

Protein
Protein IDpfu_aug1.0_10416.1_02913.t1
Definition-
>pfu_aug1.0_10416.1_02913.t1
ALGSDTGGSTRNPAAYCGVVGLKSTYGLLSRHGLIPLVNSLDVPGILTKTVDDATILLSKIHRS

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