Gene
| Gene Model ID | pfu_aug1.0_1042.1_65755 |
|---|---|
| Locus | scaffold1042.1 : 23498 ... 29945 : - |
| To GenomeBrowser | scaffold1042.1:23498..29945 |
| Genes list of scaffold | scaffold1042.1 |
| Synonym | pfu_aug2.0_2595.1_18871 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1042.1_65755.t1 | 1 | 1 | RNase_T | 268 | 432 | 7.7e-11 | 42.5 | 7.4e-14 | 2.8e-10 | 40.7 |
| pfu_aug1.0_1042.1_65755.t1 | 2 | 1 | RNase_H_2 | 268 | 299 | 2.1e-07 | 30.9 | 3.7e-05 | 0.14 | 11.9 |
| pfu_aug1.0_1042.1_65755.t1 | 2 | 2 | RNase_H_2 | 315 | 418 | 2.1e-07 | 30.9 | 8.7e-07 | 0.0032 | 17.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1042.1_65755.t1 | gi|322781953|gb|EFZ10309.1| | hypothetical protein SINV_07054, partial [Solenopsis invicta] | 8.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_1042.1_65755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1042.1_65755.t1 atgggactggcccaggtactacgagtaaagtgcagacaatgtaaggggaccaatgatgtaccaactggtagcagacatac aacgcaaagaggtggcaaagcatgggatgtcaacacgaaactagctgcaggggatcatacagagtgtggttcttggtgca gaagcgagaaaaatggatacaaaccaaagaatttgccctatggaaaacctttgtccaatgttccactgaaagatgccctt gaaaatctgttaaggaagtatatatcaaaagctgatcagctggtatccatgggttcaactcaagtgaatgaaagtctcaa caataaggtttcgagtaaggccccaaatcgcttccaggagatttatgtgcatgtacatacttgtaaatttaaaaaatgtc tttggattgaaaatgaaaaaatcttgaataaaactaatggtaggttctatggtggatcagagagtttgcagaccagattg tctgcaacagtttgccaaaagaatgaaggttattcgtatatcactcagctgaatgaaagattggccatgtctccaggaag atttaccataaagcatacacaatcccttgaaagcaaactaaagatgaagcgattgagccagtccagcaggtcctcaaaga gaaggagattagagctgaagattcagagagttgctaaagataccactcagtctgtacttgaagctgacacatatagcagc aagattggtttagaggaggatgtggatttagaggatatttctctggatatacccagtgtacttccatccaatagccccta tgtatactttgatttggaaaccactggactagcaaggacatcagatataattcaactggcagcagttcataatgacaagg aactaaatctctatgtgagcccaaaatcacagataagccctgaagcttctgcagttactgggataacttatattggtaaa gtcatgaaacacaacaacgaaatagtgcagtgcattgagcctcgggatgcgtacatactatttttggactttctagagag ttttgagagaaagcctattctggttggacataatatccaagtatttgatttaccagtcttgatgaatcagctggtgaaat tcgacatgctggacaggtttaaggaaagtgtgctgggctttattgacacccttaaactttctaagaaagtttttgataaa actgacgtgagcaattataagcagtcaacacttgtgacaactctactaggaattggttatgatgcacacaatgcacttgc agacgtcaaagctttaaggtctttgtttgaacaaaaactatcatcacaatgtggaccagatgacatgtttactgtacatt attatgctgcaagagcttcactggatccacttttgaaggataagatcatttctcctgttattcataaaaaactgatatca aattctcttagtctacaacgattgagattgatacacagaagggatcctcacaatgggattagaaatgtgtctagtgaacg agtgaactctcagaccaggatttcaaagtcaaatgctgtgataaataagattgtagattatcttaattgttga |
|
Protein
| Protein ID | pfu_aug1.0_1042.1_65755.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1042.1_65755.t1 MGLAQVLRVKCRQCKGTNDVPTGSRHTTQRGGKAWDVNTKLAAGDHTECGSWCRSEKNGYKPKNLPYGKPLSNVPLKDAL ENLLRKYISKADQLVSMGSTQVNESLNNKVSSKAPNRFQEIYVHVHTCKFKKCLWIENEKILNKTNGRFYGGSESLQTRL SATVCQKNEGYSYITQLNERLAMSPGRFTIKHTQSLESKLKMKRLSQSSRSSKRRRLELKIQRVAKDTTQSVLEADTYSS KIGLEEDVDLEDISLDIPSVLPSNSPYVYFDLETTGLARTSDIIQLAAVHNDKELNLYVSPKSQISPEASAVTGITYIGK VMKHNNEIVQCIEPRDAYILFLDFLESFERKPILVGHNIQVFDLPVLMNQLVKFDMLDRFKESVLGFIDTLKLSKKVFDK TDVSNYKQSTLVTTLLGIGYDAHNALADVKALRSLFEQKLSSQCGPDDMFTVHYYAARASLDPLLKDKIISPVIHKKLIS NSLSLQRLRLIHRRDPHNGIRNVSSERVNSQTRISKSNAVINKIVDYLNC |
|