Gene
Gene Model ID | pfu_aug1.0_10426.1_17626 |
---|---|
Locus | scaffold10426.1 : 4696 ... 23670 : + |
To GenomeBrowser | scaffold10426.1:4696..23670 |
Genes list of scaffold | scaffold10426.1 |
Synonym | pfu_aug2.0_1145.1_18130 |
Manual annotation
Study field | Environmental Response |
---|---|
Gene name | gamma-aminobutyric acid type B receptor subunit 2 |
Description | Similar to gamma-aminobutyric acid type B receptor subunit 2 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_10426.1_17626.t1 | 1 | 1 | 7tm_3 | 10 | 202 | 2.2e-20 | 73.0 | 2.0e-24 | 2.9e-20 | 72.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_10426.1_17626.t1 | gi|291244752|ref|XP_002742257.1| | 4.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_10426.1_17626.t1 |
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Definition | - |
>pfu_aug1.0_10426.1_17626.t1 atgatgtatcgtgacacgaatcgtatcatccgtctatggttggtgacgctgggctttactctggtgtttggaccaatgtt tgccaaggcttggagagtgtacttaatcttcagaaacgctggaataaaacgagtggtgatcagggacaccaaactgttta tgatgtccagtcttttcatgttagttgacatcgtcatactggtactatggcagagcatagatatcatgaaatcacagaaa gtcaagtatctcctgttgcttgacaaagaagaaaacggctcgtctgtcatggaccacatcaacatacaggagtgctcgtc atccggtacatctgtgtggctttccattctatttctatggaaaacgggactcctcggatttgggctatatttagcatgga aaacacgcaacgtgatgttacccgccatgcgagactccgtcagtatgattgttagcattttgacaaccttgttgctgacc gcaccaaccataatgcttacgtcattattacgtcactcaccgaatgctatttatatcacggaaatgacacttatcactgt ttgtgtgtccgtggttcaggtcgccacattcttgccgaaggtgcattattggtggaaaagtccaattgatgtccccatcc gaatgtcgcagtctacatatgacattaatcccaacgtaaagtcagagaaccccgaagaggagatgtttcattccgaagaa ttactccaaactccaagatctcaaagacgaacgtaccgatcaaactccgacactgaaagcgtgcaaagttaccggaaacg tcgacggaaattcacgaagaagatgacgagtactcctaacctgtttcagtcgagcggagtcgaaagcaagaaagacataa acgaagatgacattgctacaaagcagcaggaacaaaatgtgtatgaaaatgaaatgaatattacaaattctttatcaaga aaagggaatcctttcccgcgaggaacaacgatgtacgagtcaattcggtcgagacaggatatcgcgggatctgttgctaa gagttacgatttggaggacaatgacgacacgttctcttacgtcagcagctatttaaatcctacatttccgaagaaaaatt tagactatactttaagaaatagtactctgtgcatctcggccgagtccgtgtccgctatagacaatgataagctttaccca tttccgggtgatttgaaccaatcaaattgtacctctgaatcacgtgatatttcaatatctagagaaacattagacggatc aaaacgagttaaaaatcaaaagaatcgatcgaagaaacaggctaaatcggacaaacctggtgtagttatactagataact caacagagataaatagctgttatgtttga |
Protein
Protein ID | pfu_aug1.0_10426.1_17626.t1 |
---|---|
Definition | - |
>pfu_aug1.0_10426.1_17626.t1 MMYRDTNRIIRLWLVTLGFTLVFGPMFAKAWRVYLIFRNAGIKRVVIRDTKLFMMSSLFMLVDIVILVLWQSIDIMKSQK VKYLLLLDKEENGSSVMDHINIQECSSSGTSVWLSILFLWKTGLLGFGLYLAWKTRNVMLPAMRDSVSMIVSILTTLLLT APTIMLTSLLRHSPNAIYITEMTLITVCVSVVQVATFLPKVHYWWKSPIDVPIRMSQSTYDINPNVKSENPEEEMFHSEE LLQTPRSQRRTYRSNSDTESVQSYRKRRRKFTKKMTSTPNLFQSSGVESKKDINEDDIATKQQEQNVYENEMNITNSLSR KGNPFPRGTTMYESIRSRQDIAGSVAKSYDLEDNDDTFSYVSSYLNPTFPKKNLDYTLRNSTLCISAESVSAIDNDKLYP FPGDLNQSNCTSESRDISISRETLDGSKRVKNQKNRSKKQAKSDKPGVVILDNSTEINSCYV |