Gene
| Gene Model ID | pfu_aug1.0_10474.1_31930 |
|---|---|
| Locus | scaffold10474.1 : 9201 ... 16225 : - |
| To GenomeBrowser | scaffold10474.1:9201..16225 |
| Genes list of scaffold | scaffold10474.1 |
| Synonym | pfu_aug2.0_130.1_00296 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10474.1_31930.t1 | 1 | 1 | Ets | 292 | 360 | 6.6e-16 | 58.2 | 1.1e-19 | 1.6e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10474.1_31930.t1 | gi|66865864|gb|AAU11487.2| | ETS-family transcription factor [Azumapecten farreri] | 2.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10474.1_31930.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10474.1_31930.t1 atggcattagttcagaattgcaatccaccttgctaccaggaaaatgatatagaccactggttgatgcaacatccccgtgg tgtatgtatcgacgaagtcttagactggattgatggacctgaggcattctccacaaataaatatgctgaacttaaatcat ggaatctgaaggagaccgtgacgaattggaaagaagatggaacatgcgcgaagtactctcagcaagggacctgtaactcc acatcagatgacgaaaattacacagtcacaggtatgccggggcacatatgtataaacaacaaatctaaactaccagacat ttcatggttctgtgagcggtacaacgaagaggtagaaatctcaaaaaatgaagaaaatctcattccacacactgtcacgg agaaaatgttgttggaagaggattccaatttatcatcatcatcgtcttcgtcgtcattggcatattcttcattatcatca tcttcatcagatcagatttgttcccctttcaaagatacacttattttgcctacctcacaagctacgatctcaacatatga caaaatcacgatgcaaacatcggcatcatcatcatcattaatttcatcgcatgaaaacgtgtcctggatgcaagaggatt tcacttcatcgtctacgtcatctctttcctctgattcatcgttaccaccaataacagcagctaagataaggggtcatcta atgtcttcatcgaaggatataaatcagcggcggttccaagaatcttgtactagaaataaggaggtcgggaaagcaaaatc aaagctttcacagaagacccgaaaaccacgagccaaacgtgggagaataccaggacagagatcgaatacgaaacatctgt gtgattttatgaagactttgttgaacgatccatccaccaatcctagtcttgtacgatgggaagacgagccttccagagtg ttcagtattatacaatctaaaatggtggcacaaatgtggggaacttttaagaataattcaaaaatgaattatgaaaactt cggcagagcaatgaggtactgtagaaaagtgggagactttgacaatgtgccagatcgatttaaagcngaagaagaaaaaa ctgattttcaaatttggacccagagcaacataggatga |
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Protein
| Protein ID | pfu_aug1.0_10474.1_31930.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10474.1_31930.t1 MALVQNCNPPCYQENDIDHWLMQHPRGVCIDEVLDWIDGPEAFSTNKYAELKSWNLKETVTNWKEDGTCAKYSQQGTCNS TSDDENYTVTGMPGHICINNKSKLPDISWFCERYNEEVEISKNEENLIPHTVTEKMLLEEDSNLSSSSSSSSLAYSSLSS SSSDQICSPFKDTLILPTSQATISTYDKITMQTSASSSSLISSHENVSWMQEDFTSSSTSSLSSDSSLPPITAAKIRGHL MSSSKDINQRRFQESCTRNKEVGKAKSKLSQKTRKPRAKRGRIPGQRSNTKHLCDFMKTLLNDPSTNPSLVRWEDEPSRV FSIIQSKMVAQMWGTFKNNSKMNYENFGRAMRYCRKVGDFDNVPDRFKXEEEKTDFQIWTQSNIG |
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