Gene
| Gene Model ID | pfu_aug1.0_1048.1_51178 |
|---|---|
| Locus | scaffold1048.1 : 39516 ... 59027 : + |
| To GenomeBrowser | scaffold1048.1:39516..59027 |
| Genes list of scaffold | scaffold1048.1 |
| Synonym | pfu_aug2.0_671.1_04464 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1048.1_51178.t1 | 1 | 1 | O-FucT | 45 | 240 | 1.5e-36 | 126.2 | 2.4e-40 | 1.8e-36 | 125.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1048.1_51178.t1 | gi|156380834|ref|XP_001631972.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1048.1_51178.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1048.1_51178.t1 atgcgcattaaattttgttacatttgcactgataaccgcatatttttaaatcagaaaggtgagaaattatgccagattat tggatttctcaatttttttctcttcgaaaattacccagcgacgctaaagcttaagaagaacatagagttcagtgaatggt tccaggtggagccactgacaaagtaccaccgagtgatattggcagaggattttatgaagcacctagcccctaaatactgg cctccggaaaacagaacggcattctgttatgggaaaccaggcaccaagtgcaaaatgaaggagggtaatccatttgggcc attctgggatggtttaggtgttgattttgtggaagacattccctatactctacactatgcagactatgacaagtggccta aaacttttccagctgacagttatcctgtaatagccatgaggggggcacctgctcccttccctatggtagaggctaatgtc gacctacataaatacctcatatggtcagatcaaatagaggaggaggttcaggcacacatccacaaactatttaatggaga aaaatacataggcatacatctacgcaatggtgttgattggaaaagtgcatgtgaccatgctgatggacagacaagttaca tggcatcacctcagtgtttgggatataaccgcaataaaaaagtcacctctaaaatgtgctatccacctaaagaagaaata ctcag |
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Protein
| Protein ID | pfu_aug1.0_1048.1_51178.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1048.1_51178.t1 MRIKFCYICTDNRIFLNQKGEKLCQIIGFLNFFLFENYPATLKLKKNIEFSEWFQVEPLTKYHRVILAEDFMKHLAPKYW PPENRTAFCYGKPGTKCKMKEGNPFGPFWDGLGVDFVEDIPYTLHYADYDKWPKTFPADSYPVIAMRGAPAPFPMVEANV DLHKYLIWSDQIEEEVQAHIHKLFNGEKYIGIHLRNGVDWKSACDHADGQTSYMASPQCLGYNRNKKVTSKMCYPPKEEI L |
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