Gene
| Gene Model ID | pfu_aug1.0_10514.1_24752 |
|---|---|
| Locus | scaffold10514.1 : 22286 ... 24976 : + |
| To GenomeBrowser | scaffold10514.1:22286..24976 |
| Genes list of scaffold | scaffold10514.1 |
| Synonym | pfu_aug2.0_277.1_23798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10514.1_24752.t1 | 1 | 1 | Galactosyl_T | 181 | 368 | 1.99993e-41 | 141.7 | 7.00649e-45 | 3.20001e-41 | 141.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10514.1_24752.t1 | gi|260795873|ref|XP_002592929.1| | hypothetical protein BRAFLDRAFT_201989 [Branchiostoma floridae] | 8.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_10514.1_24752.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10514.1_24752.t1 atgcgtctacctcggacaaaaagaacacgacatgcgctttttatttttttgattatcattgcttcagtttccatctttta tctcaattctgtatccctccagaaaataggacctaaagcctatgcttctgatttctacctaaagtttaaagggaacactg atgatatgaaaagaaaacatgaatacagacgtgaggatgtgtcaacaagacaactcacttcctatggcttgtcaagtagt tttaaaaggctgtctttagccttccctacgactcaaaataagacaacagcacattcgaaaacaacaaagaaaacagaatt aaaatttacatctaaatattggtgtgaccacctagaaaatgaataccctttattgctgaactttacaaagctattgattc aaggggacagggagtttaaaaacatcaaaccagttcacgagcatccttttcattatatcttcaacgcatccagcgcatgc gcagcaggtgataaaatcaaggttgtatgcgttgtcaagtccgcttataacaattttgaaatgagagaaattataaggaa gacatgggcaaaagacgccaaagaagacggttccaaagttctgtttgcactaggttactcaaataatcaaagctttcagg agaaaattcgtgaagaaaacagaatatacatggatatcatacaagagaatttccttgatagttacagtaacaacacatta aaaactgttatgcaaatcagatggatttccaagttctgttccaatgctatttatgttttcatggtggatgatgacgtcat agttaattatagaaacctaattcgctattttgataatgttaacccagctgacagaaatgttttgtattctggaaatctta aaattaacgaaaagcctatgagacattcaaagagatggtatgcttcggaagaaatgtacccttacacgtgttatccccct ttcttgtccgggggtgctatattgacaagcacagaggtaattcggaagatgagtatcgcgataccctacgtgaagagctt cagactggatgatgtgtatcttggtattttacttcagaagcttggaatttcgcctcaaaagaatacacaaattcttatga tacatgatcaggacggaagaataataagtaacagcagtgacttcattgccagacacgtattccagttcccaaagaaatat cttgaaatgtacgagagcttagtaagaaagaaataa |
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Protein
| Protein ID | pfu_aug1.0_10514.1_24752.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10514.1_24752.t1 MRLPRTKRTRHALFIFLIIIASVSIFYLNSVSLQKIGPKAYASDFYLKFKGNTDDMKRKHEYRREDVSTRQLTSYGLSSS FKRLSLAFPTTQNKTTAHSKTTKKTELKFTSKYWCDHLENEYPLLLNFTKLLIQGDREFKNIKPVHEHPFHYIFNASSAC AAGDKIKVVCVVKSAYNNFEMREIIRKTWAKDAKEDGSKVLFALGYSNNQSFQEKIREENRIYMDIIQENFLDSYSNNTL KTVMQIRWISKFCSNAIYVFMVDDDVIVNYRNLIRYFDNVNPADRNVLYSGNLKINEKPMRHSKRWYASEEMYPYTCYPP FLSGGAILTSTEVIRKMSIAIPYVKSFRLDDVYLGILLQKLGISPQKNTQILMIHDQDGRIISNSSDFIARHVFQFPKKY LEMYESLVRKK |
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