Gene
| Gene Model ID | pfu_aug1.0_10535.1_02937 |
|---|---|
| Locus | scaffold10535.1 : 826 ... 11579 : + |
| To GenomeBrowser | scaffold10535.1:826..11579 |
| Genes list of scaffold | scaffold10535.1 |
| Synonym | pfu_aug2.0_1626.1_21723 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10535.1_02937.t1 | 2 | 1 | Galactosyl_T | 84 | 229 | 0.0 | 215.2 | 3.6e-33 | 1.8e-29 | 102.7 |
| pfu_aug1.0_10535.1_02937.t1 | 2 | 2 | Galactosyl_T | 360 | 545 | 0.0 | 215.2 | 2.5e-37 | 1.2e-33 | 116.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10535.1_02937.t1 | gi|260825345|ref|XP_002607627.1| | hypothetical protein BRAFLDRAFT_123958 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_10535.1_02937.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10535.1_02937.t1 atgtatacgcctctaccaaataccacgtggatacatttcaatgacacggactttcgttatcccgttgatactaacatgac cgaattagcgtatcgcatattgaggaatgagacaactgatatcagtattataaatccacatccgttccgatatattcata atccagaatcattgtgttcatcaaagagaacaaatagtcatctgcccctcctgattcttatcaagtcttcggtacctcat ttcgacttacggaatgcaatacgcagaacttgggggagaaaactgaagaaatctccaaaatacgaaatggtattcctttt aggatatttgtatcaccatcaacatttgattgataacgagcattacaaaaatggagatataattcaggaagattttatag acgcctattggaataatacgtataaaacaatcatggcctacaattgggctgtggaatactgctctattgcacacaccgtc ttgttcctcgacgacgatatgttcataaatcctgacaacttggatatatatgtgtctgaaatagagggaaaagaggaaga aaatgtatattcaggtgtattactagaaatactatcaccaatacgtgacatcaagtcaaaatgggctgtacaatatcagg aatatccgtatgattcatatccaagatatttagcaggaagaaaattgcagatatgcaccacacttacgctttctgcaatg tgcatactttacatcatttttgaaaatgctgcttatgataatcatattgttggatccaaaaaacttgcatatcaatacaa gataccatgcggacttgtcaaggaactatatccagataacaattggttaccattccaaatgttttctttcgaggaggaat tccggtatccagttgaaaccaacatgacagatttagctcttcgcattatgaaaaaagtaaaagtcaacacaaacgtcatt aatgatcaccccttccgatatatccacaatccaaaattactgtgctctatgaaggaaaataaaggtgaacttaagctttt aattcttatcaaatcgtcggtgtcccattttgaattacgagatactgtacgaaaaacatggggaagatatgtaaagagtt ctggaagataccgaactgcattgcttttgggatatttgaccccaaatcaacacgaggttgacctggagaacgatatatat ggagacataattcaagaaaattttatagacgcctattggaataatacatataaaactattatggcattcaattgggctgt tcagtattgctctaatgcacggactgtcttatttcgcgatgatgatatgtttattaatctcgaaaatctacagaaatacg tctttcaaattaatgttagaagagagagagttttattcgcaggtatcttatccaaacgaagcccacctgtgcgtgatatt cattctaaatggttcgtagaatggcatgataatccgtttgactattatcaagattatctggccggttccgtcatatttac gtctatgtatgtcgtaaaattatttcaagccatatttctatatgtcagatattttgggattgatgatatttaccttggaa tagtcgcgtataagttaaatattacaccttcaaacaatttacttttagacaacgacaatttgcgaaatttcaaaaaactt gtctag |
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Protein
| Protein ID | pfu_aug1.0_10535.1_02937.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10535.1_02937.t1 MYTPLPNTTWIHFNDTDFRYPVDTNMTELAYRILRNETTDISIINPHPFRYIHNPESLCSSKRTNSHLPLLILIKSSVPH FDLRNAIRRTWGRKLKKSPKYEMVFLLGYLYHHQHLIDNEHYKNGDIIQEDFIDAYWNNTYKTIMAYNWAVEYCSIAHTV LFLDDDMFINPDNLDIYVSEIEGKEEENVYSGVLLEILSPIRDIKSKWAVQYQEYPYDSYPRYLAGRKLQICTTLTLSAM CILYIIFENAAYDNHIVGSKKLAYQYKIPCGLVKELYPDNNWLPFQMFSFEEEFRYPVETNMTDLALRIMKKVKVNTNVI NDHPFRYIHNPKLLCSMKENKGELKLLILIKSSVSHFELRDTVRKTWGRYVKSSGRYRTALLLGYLTPNQHEVDLENDIY GDIIQENFIDAYWNNTYKTIMAFNWAVQYCSNARTVLFRDDDMFINLENLQKYVFQINVRRERVLFAGILSKRSPPVRDI HSKWFVEWHDNPFDYYQDYLAGSVIFTSMYVVKLFQAIFLYVRYFGIDDIYLGIVAYKLNITPSNNLLLDNDNLRNFKKL V |
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