Gene
| Gene Model ID | pfu_aug1.0_10538.1_17645 |
|---|---|
| Locus | scaffold10538.1 : 2750 ... 15765 : - |
| To GenomeBrowser | scaffold10538.1:2750..15765 |
| Genes list of scaffold | scaffold10538.1 |
| Synonym | pfu_aug2.0_224.1_13827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10538.1_17645.t1 | 1 | 1 | Carb_anhydrase | 45 | 271 | 0.0 | 275.8 | 0.0 | 0.0 | 275.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10538.1_17645.t1 | gi|31076619|sp|Q8UWA5.3|CAH2_TRIHK | Carbonic anhydrase 2 [Tribolodon hakonensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10538.1_17645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10538.1_17645.t1 atgtttttcaagaaaaaatattcctacaatgttctggatccaaaacatgtcaaggatccggaagctgcgttcatcatcgc cattcggcgggaaatagagaaattaaacgacgtgaagataccgattatgagctggggttatgacacaaataatggtccgg cgacgtggtgtaaagactatccagtagcaaatggcaagaggcaatcacccattgacatagtccccaacagtgtatcacaa gaaccctcactacaaaataacccactgcgtgtcacatacaaaccggaaccggatgttgacatcagtaatactggcgcgtc ggtcaaagttcaaatgacgcaacaatcagaattgactggaggtccactcaaagggaagtaccgtctggaacagtttcatc tacattggggatctgagaattcgaaaggatcagagcatactgtaaatggcaagatgtaccctgcagagttacatctagtc cattggaatgcagacaaatatagcagttttggagaggcagcggacaaaagtgacggcttggctgtgctgggttactttgt taagattgggaaggaacacaaaggtttcaaacagataacagaccacttgaaagagataacaaaaactggttcccattctc catcgccgggaaaattcgatccttcttgtcttgttaaagatgacatttcgaggtattggacgtatgaaggttcattgacc acgcctcctttgtatgaaagtgtcacgtggatcgtttttgatgacgtcatggaaatctctcaagaacagattgacgcgtt gcactggaaatgtactcgtcttaactttgactga |
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Protein
| Protein ID | pfu_aug1.0_10538.1_17645.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10538.1_17645.t1 MFFKKKYSYNVLDPKHVKDPEAAFIIAIRREIEKLNDVKIPIMSWGYDTNNGPATWCKDYPVANGKRQSPIDIVPNSVSQ EPSLQNNPLRVTYKPEPDVDISNTGASVKVQMTQQSELTGGPLKGKYRLEQFHLHWGSENSKGSEHTVNGKMYPAELHLV HWNADKYSSFGEAADKSDGLAVLGYFVKIGKEHKGFKQITDHLKEITKTGSHSPSPGKFDPSCLVKDDISRYWTYEGSLT TPPLYESVTWIVFDDVMEISQEQIDALHWKCTRLNFD |
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