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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10553.1_60788
Locus scaffold10553.1 : 19866 ... 33308 : +
To GenomeBrowser scaffold10553.1:19866..33308
Genes list of scaffold scaffold10553.1
Synonym pfu_aug2.0_599.1_30958

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues
Dshape 1
mantleEdge 1
mantlePallium 1

Transcript
Transcript IDpfu_aug1.0_10553.1_60788.t1
Definition-
>pfu_aug1.0_10553.1_60788.t1
atgatgttcggaaatcaacaaaacagaccaaaaatagcaaagaagagtgacccaaatatgctacctggatccacgtccga
aaaagacaagaacggcttggttgaagtggaagaagccaaagatcttccatcatctgagagtaaagaagatataaaagagg
acagcaaagaaaaggccgtcgaaactgaaatgggcggtgtgggatctggtgaaactggaacaatcgcctcagacgacaac
gaaacagtaaaggacaaagaagacgtagaatctgagaataactctgacgacaaattagattcatcagacgaagacatgaa
agcaatacaggaactggaggaagtcggaaaaagtcaagagggagataatggtttgtctaacagtagtgggcaaatcgatg
tcgacgaatccgagacgaacaataaagagcaggattctaacaacttaaggaatccatataaactctaccaagcttacgaa
gcataccaaaatcttttatcggacactccaaactacttcagctatccagtttctctaaaggattattttggttcatattt
aagacgtcgacgaagagcaccttcaaagtttcttttaaacaaagcctccaagaaaatccacaggtcgaaacgtgatttgc
catacgatgatgatgatgacgacgacgtttatttcaatccatattacttccccgaggctgcatcctcatacaggttcgag
ccagagctcatacccgaggaagaagtggatgtgaatccatatctattagcaaaggaagttgacaccgccttacccaccga
tagtgtcaatgtgcctttgccgatccctgatggatatgaagttcaagaaataatatacgatggacagccgggcttcttca
ttccggcaagggatgacgtaaattatacacccaccaataaaagaagtccttactttttccccttctcagaagagcctgga
acacactacggtgctttcattccacaaaagcgagaatacgtagattcatacgaacgactggtgaggttggccagggccct
agctatgagaccagagggaagggaaaggatgctacaggtaaccattattaatatacaaagttccttaagaaaatga

Protein
Protein IDpfu_aug1.0_10553.1_60788.t1
Definition-
>pfu_aug1.0_10553.1_60788.t1
MMFGNQQNRPKIAKKSDPNMLPGSTSEKDKNGLVEVEEAKDLPSSESKEDIKEDSKEKAVETEMGGVGSGETGTIASDDN
ETVKDKEDVESENNSDDKLDSSDEDMKAIQELEEVGKSQEGDNGLSNSSGQIDVDESETNNKEQDSNNLRNPYKLYQAYE
AYQNLLSDTPNYFSYPVSLKDYFGSYLRRRRRAPSKFLLNKASKKIHRSKRDLPYDDDDDDDVYFNPYYFPEAASSYRFE
PELIPEEEVDVNPYLLAKEVDTALPTDSVNVPLPIPDGYEVQEIIYDGQPGFFIPARDDVNYTPTNKRSPYFFPFSEEPG
THYGAFIPQKREYVDSYERLVRLARALAMRPEGRERMLQVTIINIQSSLRK

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