Gene
Gene Model ID | pfu_aug1.0_1057.1_65766 |
---|---|
Locus | scaffold1057.1 : 50096 ... 58258 : + |
To GenomeBrowser | scaffold1057.1:50096..58258 |
Genes list of scaffold | scaffold1057.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
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Gene name | Tbx20 |
Description | Blast hits and simple NJ tree show an affinity to Tbx20. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1057.1_65766.t1 | 1 | 1 | T-box | 1 | 90 | 1.2e-33 | 116.0 | 2.4e-37 | 1.8e-33 | 115.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1057.1_65766.t1 | gi|261337146|ref|NP_001159692.1| | T-box transcription factor TBX20 isoform 2 [Homo sapiens] | 3.00004e-41 |
Transcript
Transcript ID | pfu_aug1.0_1057.1_65766.t1 |
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Definition | - |
>pfu_aug1.0_1057.1_65766.t1 atgttccccacccttcgagtatctttcactggtatagacccggaagtacgatatatggtcctgatggatatagtcccggt tgacaacaagagatatcgctacgcctatcaccgatcttcctggttagtcgccggaaaagcagacccaccactacctacgc ggctctatatgcacccagactccccgtacacaggggaacaactacagaaacaaacagtgtcatttgaaaaattaaaactg accaataacatgctggataaaaatggacacaagatcccagcgccttggaaaaacaaggaatgcttccgcatccccattgg cccgtgtggcgacctataccgtcgagcctggttggtcagtgcaaacaatttgagactccgtgattcgattcccgccagtg cttctacgtatacttctccggaacccaccggacttcatcatccgccggcagcctaccgctaccatccttatctcacgccg gataaaatcagcgccgcacagaagtctgcggaatcatcggtcacggacacctgtcgaccgtaa |
Protein
Protein ID | pfu_aug1.0_1057.1_65766.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1057.1_65766.t1 MFPTLRVSFTGIDPEVRYMVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPTRLYMHPDSPYTGEQLQKQTVSFEKLKL TNNMLDKNGHKIPAPWKNKECFRIPIGPCGDLYRRAWLVSANNLRLRDSIPASASTYTSPEPTGLHHPPAAYRYHPYLTP DKISAAQKSAESSVTDTCRP |