Gene
| Gene Model ID | pfu_aug1.0_10581.1_02942 |
|---|---|
| Locus | scaffold10581.1 : 1 ... 7285 : - |
| To GenomeBrowser | scaffold10581.1:1..7285 |
| Genes list of scaffold | scaffold10581.1 |
| Synonym | pfu_aug2.0_193.1_10422 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10581.1_02942.t1 | 1 | 1 | DUF4371 | 253 | 451 | 7.3e-39 | 133.7 | 4.19969e-42 | 1.5e-38 | 132.6 |
| pfu_aug1.0_10581.1_02942.t1 | 1 | 1 | Dimer_Tnp_hAT | 787 | 839 | 2.2e-11 | 43.2 | 1.6e-14 | 6.1e-11 | 41.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10581.1_02942.t1 | gi|340382018|ref|XP_003389518.1| | PREDICTED: zinc finger MYM-type protein 1-like [Amphimedon queenslandica] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_10581.1_02942.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10581.1_02942.t1 atggcgttatcaaccgtgcttcagataccaatacattctgtgtacccggacgtcaatcaagcaatacgacctctcttcaa cacagtattgcatcctgtccgttcttcaaaacaacttcttgtgcatactgacacaatgcatatattatggtctcgtgatg gatgtcttgacaatcgagaaggcgctctatatgagccgaaccattttgtgccaattgtcatgaggaaatcgtccaagggc gaaaagcgccctcactcgaagagtacacaagaggtaaaacaagcaagatggaaaaaagtaaagaaagacacaaaccaacc acaaataggcacttttttcaaaacgaaggttaaaatgccaagcgaacaatcacttcatactgatgactcgagcagttaca aaaaggatgacacaaatccaaacgacagaaacaacaataaaccagcacatgacaaaaaaagtgaaactaaaacaaaaacc gacaacaatgagaagatacattcagagagcaggaaggagggagcaaacgacaactcaaaagcgaatgaaaaggaaggcat gaagtttgaaagtgttcgaaaggagaaatcaaagtttagtagtggcaataaggcaaatgaatcagatgacaacagtgatt ctgattttgatatctccgacccgtcaaatctggaatgcactgacggcatatgctgcacaggagatagaccgtatcaacca cttgagaaagaagtcttacgccaaatgatgaaaacaacagaagcaagttataaaatggaaaatctactgaaacaaaaaga aagtgtaactgaacaagttcacaaacaaggacagaaagaacaagaagaaagaaggtctgcgctatacactcaaacgtcat ctctgaagtacctgctcagacagggaatggctaccagaggtcaccatgacagcgaagggaatttcattcagctgttgaga ctacgagcagaggataaccccttacttcaaacttggattgaaaatgggcgttatttatccccagagattgttaatgagca aatatcactaataggacaaaacatcctaagacatttgttggatagtgttaaaacttccaaatggtattctgtaatggcag atgagtgtatggatgtgtcatatgaagagcaattggtgatttgtgtacggtgggtagacagtgatctgcaaatacatgaa gatatgttaggactcctgaagatagaatcacagacaagcaactacataacggcagcaatcaaggacattttgctgagatg tgggcttccattagagttatgtcggggtcaagcatatgatggagctccgaatatgtctggtcatttatctggtgtggcca aacagatccaggatcaatcaccatccgcacttggagttcactgtctagcccattgcatcaacctatgtgtacaggacgtt acgaaaaaatgtcagccggtgagagactccatggacttggttatagaaattgaaaagcttatatgcctttctcctaaacg gtcccatttgtttctagagcagaaacaactccatggttctgccgggtcaccaaatttaagaccaatttgtcctacacgat ggacagtgaggacttacgcaattgaatctgtattaaaaaactacaaggtccttcaagagacattagacaacatacacaag aacacccgtgatgaatattcacgccgtgcaggtgggcaattggcaatgatggacaaatttagtaccttcttcggattgaa gctttcgcatcttatctttgcagcgtctgaacagctatcattatctgttcaaggaaaggaaacgagcgcacatgatgctt acaaagccgcaaaggcgactgaaagttactttgaacgacaacgacaagaatcggtgtttaataagttttatgagtcagtc atcgacgaggctaaagatcttaccgatcccccaacactacccaggtatcgacggattcccaaacgagtcgatgatggaac tgaacagcacagatttgacacggtgaagggctattatcgtcagcagtactatgaagctctagacctagcaaaaggtgagc ttaatgctcgatttgatcaaaagaacatgtcagttgtccaggaaattgaagccctgctgcttagtgccgctaatggtgaa gatgtttctatcccatcctcagtagcagatctttacaagaacgacatctctctgggtagtttggaaacacaattaaaact ccttccgggcatattcaaggatgatgattcaaagatcaagatcaaacgtgtcacccttattgataccattagcacctata tgttgagatctgaagcaaacaagagattactttcagacgtatattctctcttaaaaatttacctcacgattccagtaacc acagcaacggctgagagggccttctcgtcactgaggcgaatcaaaacttaccttcgaagcacaatgactcaagcaagatt gaaccattgcatgctcgcatatgtgcacaaagagttgactgacaatgtagatgtgaaagaaatagcttctaatttcatta agaagttccctgtacgccaagtctt |
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Protein
| Protein ID | pfu_aug1.0_10581.1_02942.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10581.1_02942.t1 MALSTVLQIPIHSVYPDVNQAIRPLFNTVLHPVRSSKQLLVHTDTMHILWSRDGCLDNREGALYEPNHFVPIVMRKSSKG EKRPHSKSTQEVKQARWKKVKKDTNQPQIGTFFKTKVKMPSEQSLHTDDSSSYKKDDTNPNDRNNNKPAHDKKSETKTKT DNNEKIHSESRKEGANDNSKANEKEGMKFESVRKEKSKFSSGNKANESDDNSDSDFDISDPSNLECTDGICCTGDRPYQP LEKEVLRQMMKTTEASYKMENLLKQKESVTEQVHKQGQKEQEERRSALYTQTSSLKYLLRQGMATRGHHDSEGNFIQLLR LRAEDNPLLQTWIENGRYLSPEIVNEQISLIGQNILRHLLDSVKTSKWYSVMADECMDVSYEEQLVICVRWVDSDLQIHE DMLGLLKIESQTSNYITAAIKDILLRCGLPLELCRGQAYDGAPNMSGHLSGVAKQIQDQSPSALGVHCLAHCINLCVQDV TKKCQPVRDSMDLVIEIEKLICLSPKRSHLFLEQKQLHGSAGSPNLRPICPTRWTVRTYAIESVLKNYKVLQETLDNIHK NTRDEYSRRAGGQLAMMDKFSTFFGLKLSHLIFAASEQLSLSVQGKETSAHDAYKAAKATESYFERQRQESVFNKFYESV IDEAKDLTDPPTLPRYRRIPKRVDDGTEQHRFDTVKGYYRQQYYEALDLAKGELNARFDQKNMSVVQEIEALLLSAANGE DVSIPSSVADLYKNDISLGSLETQLKLLPGIFKDDDSKIKIKRVTLIDTISTYMLRSEANKRLLSDVYSLLKIYLTIPVT TATAERAFSSLRRIKTYLRSTMTQARLNHCMLAYVHKELTDNVDVKEIASNFIKKFPVRQV |
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