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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10581.1_02942
Locus scaffold10581.1 : 1 ... 7285 : -
To GenomeBrowser scaffold10581.1:1..7285
Genes list of scaffold scaffold10581.1
Synonym pfu_aug2.0_193.1_10422

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10581.1_02942.t1 1 1 DUF4371 253 451 7.3e-39 133.7 4.19969e-42 1.5e-38 132.6
pfu_aug1.0_10581.1_02942.t1 1 1 Dimer_Tnp_hAT 787 839 2.2e-11 43.2 1.6e-14 6.1e-11 41.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10581.1_02942.t1 gi|340382018|ref|XP_003389518.1| PREDICTED: zinc finger MYM-type protein 1-like [Amphimedon queenslandica] 0.0

Transcript
Transcript IDpfu_aug1.0_10581.1_02942.t1
Definition-
>pfu_aug1.0_10581.1_02942.t1
atggcgttatcaaccgtgcttcagataccaatacattctgtgtacccggacgtcaatcaagcaatacgacctctcttcaa
cacagtattgcatcctgtccgttcttcaaaacaacttcttgtgcatactgacacaatgcatatattatggtctcgtgatg
gatgtcttgacaatcgagaaggcgctctatatgagccgaaccattttgtgccaattgtcatgaggaaatcgtccaagggc
gaaaagcgccctcactcgaagagtacacaagaggtaaaacaagcaagatggaaaaaagtaaagaaagacacaaaccaacc
acaaataggcacttttttcaaaacgaaggttaaaatgccaagcgaacaatcacttcatactgatgactcgagcagttaca
aaaaggatgacacaaatccaaacgacagaaacaacaataaaccagcacatgacaaaaaaagtgaaactaaaacaaaaacc
gacaacaatgagaagatacattcagagagcaggaaggagggagcaaacgacaactcaaaagcgaatgaaaaggaaggcat
gaagtttgaaagtgttcgaaaggagaaatcaaagtttagtagtggcaataaggcaaatgaatcagatgacaacagtgatt
ctgattttgatatctccgacccgtcaaatctggaatgcactgacggcatatgctgcacaggagatagaccgtatcaacca
cttgagaaagaagtcttacgccaaatgatgaaaacaacagaagcaagttataaaatggaaaatctactgaaacaaaaaga
aagtgtaactgaacaagttcacaaacaaggacagaaagaacaagaagaaagaaggtctgcgctatacactcaaacgtcat
ctctgaagtacctgctcagacagggaatggctaccagaggtcaccatgacagcgaagggaatttcattcagctgttgaga
ctacgagcagaggataaccccttacttcaaacttggattgaaaatgggcgttatttatccccagagattgttaatgagca
aatatcactaataggacaaaacatcctaagacatttgttggatagtgttaaaacttccaaatggtattctgtaatggcag
atgagtgtatggatgtgtcatatgaagagcaattggtgatttgtgtacggtgggtagacagtgatctgcaaatacatgaa
gatatgttaggactcctgaagatagaatcacagacaagcaactacataacggcagcaatcaaggacattttgctgagatg
tgggcttccattagagttatgtcggggtcaagcatatgatggagctccgaatatgtctggtcatttatctggtgtggcca
aacagatccaggatcaatcaccatccgcacttggagttcactgtctagcccattgcatcaacctatgtgtacaggacgtt
acgaaaaaatgtcagccggtgagagactccatggacttggttatagaaattgaaaagcttatatgcctttctcctaaacg
gtcccatttgtttctagagcagaaacaactccatggttctgccgggtcaccaaatttaagaccaatttgtcctacacgat
ggacagtgaggacttacgcaattgaatctgtattaaaaaactacaaggtccttcaagagacattagacaacatacacaag
aacacccgtgatgaatattcacgccgtgcaggtgggcaattggcaatgatggacaaatttagtaccttcttcggattgaa
gctttcgcatcttatctttgcagcgtctgaacagctatcattatctgttcaaggaaaggaaacgagcgcacatgatgctt
acaaagccgcaaaggcgactgaaagttactttgaacgacaacgacaagaatcggtgtttaataagttttatgagtcagtc
atcgacgaggctaaagatcttaccgatcccccaacactacccaggtatcgacggattcccaaacgagtcgatgatggaac
tgaacagcacagatttgacacggtgaagggctattatcgtcagcagtactatgaagctctagacctagcaaaaggtgagc
ttaatgctcgatttgatcaaaagaacatgtcagttgtccaggaaattgaagccctgctgcttagtgccgctaatggtgaa
gatgtttctatcccatcctcagtagcagatctttacaagaacgacatctctctgggtagtttggaaacacaattaaaact
ccttccgggcatattcaaggatgatgattcaaagatcaagatcaaacgtgtcacccttattgataccattagcacctata
tgttgagatctgaagcaaacaagagattactttcagacgtatattctctcttaaaaatttacctcacgattccagtaacc
acagcaacggctgagagggccttctcgtcactgaggcgaatcaaaacttaccttcgaagcacaatgactcaagcaagatt
gaaccattgcatgctcgcatatgtgcacaaagagttgactgacaatgtagatgtgaaagaaatagcttctaatttcatta
agaagttccctgtacgccaagtctt

Protein
Protein IDpfu_aug1.0_10581.1_02942.t1
Definition-
>pfu_aug1.0_10581.1_02942.t1
MALSTVLQIPIHSVYPDVNQAIRPLFNTVLHPVRSSKQLLVHTDTMHILWSRDGCLDNREGALYEPNHFVPIVMRKSSKG
EKRPHSKSTQEVKQARWKKVKKDTNQPQIGTFFKTKVKMPSEQSLHTDDSSSYKKDDTNPNDRNNNKPAHDKKSETKTKT
DNNEKIHSESRKEGANDNSKANEKEGMKFESVRKEKSKFSSGNKANESDDNSDSDFDISDPSNLECTDGICCTGDRPYQP
LEKEVLRQMMKTTEASYKMENLLKQKESVTEQVHKQGQKEQEERRSALYTQTSSLKYLLRQGMATRGHHDSEGNFIQLLR
LRAEDNPLLQTWIENGRYLSPEIVNEQISLIGQNILRHLLDSVKTSKWYSVMADECMDVSYEEQLVICVRWVDSDLQIHE
DMLGLLKIESQTSNYITAAIKDILLRCGLPLELCRGQAYDGAPNMSGHLSGVAKQIQDQSPSALGVHCLAHCINLCVQDV
TKKCQPVRDSMDLVIEIEKLICLSPKRSHLFLEQKQLHGSAGSPNLRPICPTRWTVRTYAIESVLKNYKVLQETLDNIHK
NTRDEYSRRAGGQLAMMDKFSTFFGLKLSHLIFAASEQLSLSVQGKETSAHDAYKAAKATESYFERQRQESVFNKFYESV
IDEAKDLTDPPTLPRYRRIPKRVDDGTEQHRFDTVKGYYRQQYYEALDLAKGELNARFDQKNMSVVQEIEALLLSAANGE
DVSIPSSVADLYKNDISLGSLETQLKLLPGIFKDDDSKIKIKRVTLIDTISTYMLRSEANKRLLSDVYSLLKIYLTIPVT
TATAERAFSSLRRIKTYLRSTMTQARLNHCMLAYVHKELTDNVDVKEIASNFIKKFPVRQV

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