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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10603.1_24769
Locus scaffold10603.1 : 9437 ... 35055 : -
To GenomeBrowser scaffold10603.1:9437..35055
Genes list of scaffold scaffold10603.1
Synonym pfu_aug2.0_1557.1_24999

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10603.1_24769.t1 1 1 Globin 43 132 1.3e-14 54.4 1.2e-18 1.7e-14 54.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10603.1_24769.t1 gi|242013633|ref|XP_002427507.1| Globin D, coelomic, putative [Pediculus humanus corporis] 8.0e-24

Transcript
Transcript IDpfu_aug1.0_10603.1_24769.t1
Definition-
>pfu_aug1.0_10603.1_24769.t1
atgattttatcagaaagtcgaacagatcaatttgcagcatggaccggacatgcacgtttcgggaactcaaacctggtcag
tgatcctcagtctaaacgatgtaatattcctaaagaatgtgagaatcattatgtccgaagtaacttgttgtgactattcg
agaaaaatcccgatttaaaagacttatttgtgccttttcgtggaatggacatgaatcaattacgtcagcatgagggtctg
agagagcatggtctccgtgttatgggatccatagaaaaatgtgtcgccaggattgacagtcctcggcgatttgacgccat
gcttacggaacttggacacaaacacgtcgttttcaatatcaaacccgattattttgagcttcttggtcctcagcttatca
ccgcaataaaacctgcgattggggagaaatggacaccggaagtcgaggaggcatggatgaacttttatcacctaatcata
tataccatgagagtggctatggtttcatga

Protein
Protein IDpfu_aug1.0_10603.1_24769.t1
Definition-
>pfu_aug1.0_10603.1_24769.t1
MILSESRTDQFAAWTGHARFGNSNLVSDPQSKRCNIPKECENHYVRSNLLXLFEKNPDLKDLFVPFRGMDMNQLRQHEGL
REHGLRVMGSIEKCVARIDSPRRFDAMLTELGHKHVVFNIKPDYFELLGPQLITAIKPAIGEKWTPEVEEAWMNFYHLII
YTMRVAMVS

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