Gene
| Gene Model ID | pfu_aug1.0_10622.1_46238 |
|---|---|
| Locus | scaffold10622.1 : 33776 ... 35827 : + |
| To GenomeBrowser | scaffold10622.1:33776..35827 |
| Genes list of scaffold | scaffold10622.1 |
| Synonym | pfu_aug2.0_74.1_13532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10622.1_46238.t1 | 1 | 1 | 7tm_1 | 8 | 225 | 1.4e-19 | 70.2 | 7.8e-23 | 1.4e-19 | 70.2 |
| pfu_aug1.0_10622.1_46238.t1 | 1 | 1 | 7TM_GPCR_Srw | 13 | 276 | 1.5e-11 | 44.0 | 2.0e-14 | 3.7e-11 | 42.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10622.1_46238.t1 | gi|307188547|gb|EFN73283.1| | Growth hormone secretagogue receptor type 1 [Camponotus floridanus] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_10622.1_46238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10622.1_46238.t1 atgagcagcagcaaattcaaacatctgacatccagaatattcctcattgctttggccatatcggacaccatcctcttagt cacacagcctttcaacaaaatgttcgtcatgaagctgcttggtcgcgacatccgggcactgtctcagatcggctgcaaga ttttctttcttttcttccgcaccggtaagatgacgtcgtcgtggtttgttgtattcctgtgcctggagaggtttgtcgct gtctggtttcccctgaaagccaaaataatctggaggaaagaagttgctcttgctgcaatctgccttatctacgtcatcat aacctcgttcaatgctgtctggacgtactcctcaaaggttctagacgatggattctgttaccctgattactttgacaaga gcatcccaagcgaagtccaatggtacaaaaacatgctgacagctgggtcaagtttgtattctttgattccaatttgtatc ttggtaaccttcacccctctcatcctatacaaattatctcagcacagacgaacgaggatgaagatgacaggttctagtca acaaaagtccaagtctgcacaatccacaaaaaccaccgctatgttgataggagtaatgatagcctatttcatattggtaa cgccgatcacggtccttcataacatagcgttttacatcggggtcaaagcttttggcaacaataccaaaggatttcttatc tatcgagacgtagctcagattctggaacaagtcaactatagcattaatttcatcttgtatgttgtcgcaagtcagcagtt tcgggctgggttggtatccattttgaggtttgacaaatgccaaacagccctgtcaagaataacatcatctcagacaaagg aaaccagagctaagaaaaccacaaataaggacaacaacgacgatgatgataaaaaggatgacaaaaatgatgacaaaccc agagaggaaaatattgaaattgtagatgttgaaccaaacaccggaagtcctagcaacggaatgaatcaaactgaaaagga ggagaagatagacgatgatgataaaaatgacgagaaaggtgagaactctcccaaaaacgaaaacaaatga |
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Protein
| Protein ID | pfu_aug1.0_10622.1_46238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10622.1_46238.t1 MSSSKFKHLTSRIFLIALAISDTILLVTQPFNKMFVMKLLGRDIRALSQIGCKIFFLFFRTGKMTSSWFVVFLCLERFVA VWFPLKAKIIWRKEVALAAICLIYVIITSFNAVWTYSSKVLDDGFCYPDYFDKSIPSEVQWYKNMLTAGSSLYSLIPICI LVTFTPLILYKLSQHRRTRMKMTGSSQQKSKSAQSTKTTAMLIGVMIAYFILVTPITVLHNIAFYIGVKAFGNNTKGFLI YRDVAQILEQVNYSINFILYVVASQQFRAGLVSILRFDKCQTALSRITSSQTKETRAKKTTNKDNNDDDDKKDDKNDDKP REENIEIVDVEPNTGSPSNGMNQTEKEEKIDDDDKNDEKGENSPKNENK |
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