Gene
| Gene Model ID | pfu_aug1.0_1063.1_07786 |
|---|---|
| Locus | scaffold1063.1 : 32456 ... 38653 : + |
| To GenomeBrowser | scaffold1063.1:32456..38653 |
| Genes list of scaffold | scaffold1063.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1063.1_07786.t1 | 2 | 1 | HTH_23 | 6 | 44 | 5.0e-07 | 29.1 | 2.1e-09 | 3.4e-06 | 26.5 |
| pfu_aug1.0_1063.1_07786.t1 | 1 | 1 | HTH_Tnp_Tc3_2 | 66 | 137 | 8.7e-09 | 35.3 | 1.2e-11 | 1.9e-08 | 34.2 |
| pfu_aug1.0_1063.1_07786.t1 | 2 | 2 | HTH_23 | 96 | 105 | 5.0e-07 | 29.1 | 0.43 | 710.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1063.1_07786.t1 | gi|209736238|gb|ACI68988.1| | Transposable element Tc1 transposase [Salmo salar] | 6.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_1063.1_07786.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1063.1_07786.t1 atgcctccattgaataaagaactgcggcttcgggcagttggaatgatagaggcaggtcgacgtcattctgacgtcgcgtc gcattttggagtgacgcggatcactatttcacgtttggctagtcgttacaggaccactgtatcagtaaacgaccgtcgtc gatctgccaggcctcaagtaaccactgctgctcaagaccgatatatagtgtcgtcacacctacgcaatagatttttgaca gttccgtccacagccgttggaacgcctggtcgcaacaacaatagaataagtgcaaatactgtacgcaggagacttgcaga gaaaggaatcaaggttcgacgtccatataagaggatcaaattcacccagcgtcacagacgtaataaagcacaatgggccc acaatcacgcaagatggacgcgtcaccagtggaatggcgtcgtcttcagcgatgaatcacgatatctattggatcgcgtt gatggacgccaatgggtgtataggagacgaggggaacgttattccgacgcctgtgtacggaagttgatagatacggaggt ggaagtatcatggtacatgtacctggatgatatttttactatcgacaatcctttttttgagaaatataaaaatgtcctgt ag |
|
Protein
| Protein ID | pfu_aug1.0_1063.1_07786.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1063.1_07786.t1 MPPLNKELRLRAVGMIEAGRRHSDVASHFGVTRITISRLASRYRTTVSVNDRRRSARPQVTTAAQDRYIVSSHLRNRFLT VPSTAVGTPGRNNNRISANTVRRRLAEKGIKVRRPYKRIKFTQRHRRNKAQWAHNHARWTRHQWNGVVFSDESRYLLDRV DGRQWVYRRRGERYSDACVRKLIDTEVEVSWYMYLDDIFTIDNPFFEKYKNVL |
|