Gene
| Gene Model ID | pfu_aug1.0_1064.1_15330 |
|---|---|
| Locus | scaffold1064.1 : 18355 ... 23245 : - |
| To GenomeBrowser | scaffold1064.1:18355..23245 |
| Genes list of scaffold | scaffold1064.1 |
| Synonym | pfu_aug2.0_14.1_13390 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1064.1_15330.t1 | 1 | 1 | Hist_deacetyl | 1 | 125 | 2.7e-30 | 105.7 | 2.9e-34 | 4.3e-30 | 105.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1064.1_15330.t1 | gi|260799294|ref|XP_002594632.1| | hypothetical protein BRAFLDRAFT_217516 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1064.1_15330.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1064.1_15330.t1 atgacagtatcattccacaaatacggagaatattttccgggtaccggagatctcagggacattggtgctgggaaaggaaa gtactacgcagtgaattttccattaagagatggtattgatgatgagtcatatgaatcaatatttaaaccagtaatgacca aagtgatggagatgtaccagcccagtgctatagtactacaatgtggagctgattcattgtctggggacaggctcggctgc tttaatctgacactcaaaggtcatggtaaggcggtagagtttatgaagaagtggaacctacctctcctacttctaggtgg tgggggttatacaatcagaaatgtggccagatgctggacatttgaaacctcaatagctctcggagtagatatagcaaacg agttaccatacaatgactactttgaatattacggtcccgacttcaaacttcacatcagtccctcaaatatggccaatcag aatacaggagaatacatggaaaaaatcaaaacaaggttgtttgaaaatctccgaatgttaccccatgctcctggtgttca gatgtcagctataccagaggacgcattgaacaatgaagatgatgaagaagatgaggataagaatccagatgaaagaatct caatccgtgccagtgacaagaggataacaggggaagaagaatactccgatagtgaagatgaaggtgagggaggacgtaaa gatcgggctagctacagacctaaagctaaaagaatgaagacagaagcaggggaaacaaagaaggagaccacagcagaaaa agatgaatcaaagaaagatgagaaagaacctaagaaggaacctatagaatcaaaagatgaaaataaatctgcctcagcag aaaagactgaagagaaaccagaatctgcagagaaaaaagtatcatctaccccagctaccactgctaaggagtctgcacct acagaggccaaagaaggtgaaactgttaatggtgctcagaagatggagcattga |
|
Protein
| Protein ID | pfu_aug1.0_1064.1_15330.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1064.1_15330.t1 MTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYESIFKPVMTKVMEMYQPSAIVLQCGADSLSGDRLGC FNLTLKGHGKAVEFMKKWNLPLLLLGGGGYTIRNVARCWTFETSIALGVDIANELPYNDYFEYYGPDFKLHISPSNMANQ NTGEYMEKIKTRLFENLRMLPHAPGVQMSAIPEDALNNEDDEEDEDKNPDERISIRASDKRITGEEEYSDSEDEGEGGRK DRASYRPKAKRMKTEAGETKKETTAEKDESKKDEKEPKKEPIESKDENKSASAEKTEEKPESAEKKVSSTPATTAKESAP TEAKEGETVNGAQKMEH |
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