Gene
| Gene Model ID | pfu_aug1.0_1064.1_15334 |
|---|---|
| Locus | scaffold1064.1 : 57906 ... 58897 : + |
| To GenomeBrowser | scaffold1064.1:57906..58897 |
| Genes list of scaffold | scaffold1064.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1064.1_15334.t1 | 1 | 1 | SCP2 | 4 | 91 | 3.4e-29 | 101.1 | 8.0e-33 | 4.0e-29 | 100.9 |
| pfu_aug1.0_1064.1_15334.t1 | 1 | 1 | Alkyl_sulf_C | 17 | 96 | 1.2e-08 | 34.9 | 3.0e-12 | 1.5e-08 | 34.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1064.1_15334.t1 | gi|348505416|ref|XP_003440257.1| | PREDICTED: hydroxysteroid dehydrogenase-like protein 2-like isoform X1 [Oreochromis niloticus] | 2.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1064.1_15334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1064.1_15334.t1 atgttgagtgaggatttggtgtcatcagtgggaggagtgtttcagtttaatcttggaggtgacaatacgggagaatggta tgttgaccttaagaatggatctggtgcagtaggtaagggagctgctgcagaacctcagtgtacaatgaccatggacagtg cagactttaccaaaatgtttgccggagaactcaaaccaacagctgcgttcatgtccggaaaactcaaaattaaaggagat atggcattagcaatgaaactagaaaaacttatggcaaaaatgaggccaaaattatga |
|
Protein
| Protein ID | pfu_aug1.0_1064.1_15334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1064.1_15334.t1 MLSEDLVSSVGGVFQFNLGGDNTGEWYVDLKNGSGAVGKGAAAEPQCTMTMDSADFTKMFAGELKPTAAFMSGKLKIKGD MALAMKLEKLMAKMRPKL |
|