Gene
| Gene Model ID | pfu_aug1.0_106465.1_49604 |
|---|---|
| Locus | scaffold106465.1 : 12 ... 1147 : - |
| To GenomeBrowser | scaffold106465.1:12..1147 |
| Genes list of scaffold | scaffold106465.1 |
| Synonym | pfu_aug2.0_1102.1_08168 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_106465.1_49604.t1 | 10 | 1 | zf-H2C2_2 | 64 | 73 | 0.0 | 184.2 | 0.086 | 120.0 | 3.2 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 1 | zf-C2H2_4 | 64 | 85 | 3.8e-21 | 73.7 | 5.5e-05 | 0.074 | 13.4 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 1 | zf-C2H2 | 65 | 85 | 1.6e-30 | 103.5 | 8.9e-06 | 0.012 | 15.9 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 1 | zf-H2C2_5 | 65 | 86 | 5.4e-10 | 38.9 | 3.0e-08 | 4.0e-05 | 23.5 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 2 | zf-H2C2_2 | 78 | 102 | 0.0 | 184.2 | 3.6e-12 | 4.9e-09 | 36.0 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 2 | zf-C2H2 | 91 | 113 | 1.6e-30 | 103.5 | 2.0e-06 | 0.0028 | 17.9 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 2 | zf-C2H2_4 | 91 | 113 | 3.8e-21 | 73.7 | 0.00075 | 1.0 | 9.8 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 3 | zf-H2C2_2 | 105 | 130 | 0.0 | 184.2 | 1.1e-08 | 1.5e-05 | 25.0 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 3 | zf-C2H2 | 119 | 142 | 1.6e-30 | 103.5 | 1.2e-06 | 0.0016 | 18.6 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 3 | zf-C2H2_4 | 119 | 142 | 3.8e-21 | 73.7 | 7.2e-06 | 0.0097 | 16.1 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 2 | zf-H2C2_5 | 119 | 143 | 5.4e-10 | 38.9 | 0.0082 | 11.0 | 6.4 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 4 | zf-H2C2_2 | 134 | 157 | 0.0 | 184.2 | 1.7e-09 | 2.3e-06 | 27.6 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 4 | zf-C2H2 | 148 | 170 | 1.6e-30 | 103.5 | 1.8e-05 | 0.024 | 14.9 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 4 | zf-C2H2_4 | 148 | 170 | 3.8e-21 | 73.7 | 0.0043 | 5.8 | 7.4 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 3 | zf-H2C2_5 | 148 | 170 | 5.4e-10 | 38.9 | 1.6e-05 | 0.021 | 15.0 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 5 | zf-H2C2_2 | 163 | 184 | 0.0 | 184.2 | 1.4e-11 | 1.9e-08 | 34.2 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 5 | zf-C2H2 | 176 | 198 | 1.6e-30 | 103.5 | 8.4e-06 | 0.011 | 15.9 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 5 | zf-C2H2_4 | 176 | 198 | 3.8e-21 | 73.7 | 2.4e-05 | 0.032 | 14.5 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 4 | zf-H2C2_5 | 176 | 198 | 5.4e-10 | 38.9 | 1.7e-07 | 0.00023 | 21.2 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 6 | zf-H2C2_2 | 191 | 214 | 0.0 | 184.2 | 6.9e-13 | 9.3e-10 | 38.3 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 6 | zf-C2H2 | 204 | 226 | 1.6e-30 | 103.5 | 5.8e-07 | 0.00079 | 19.6 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 6 | zf-C2H2_4 | 204 | 226 | 3.8e-21 | 73.7 | 3.0e-07 | 0.0004 | 20.5 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 7 | zf-H2C2_2 | 218 | 242 | 0.0 | 184.2 | 7.3e-07 | 0.00099 | 19.2 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 7 | zf-C2H2 | 233 | 256 | 1.6e-30 | 103.5 | 3.9e-06 | 0.0053 | 17.0 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 7 | zf-C2H2_4 | 233 | 256 | 3.8e-21 | 73.7 | 1.8e-05 | 0.024 | 14.9 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 5 | zf-H2C2_5 | 233 | 254 | 5.4e-10 | 38.9 | 0.089 | 120.0 | 3.2 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 8 | zf-H2C2_2 | 247 | 271 | 0.0 | 184.2 | 3.2e-08 | 4.3e-05 | 23.5 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 8 | zf-C2H2 | 263 | 284 | 1.6e-30 | 103.5 | 2.5e-06 | 0.0034 | 17.6 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 8 | zf-C2H2_4 | 263 | 284 | 3.8e-21 | 73.7 | 6.1e-05 | 0.082 | 13.2 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 6 | zf-H2C2_5 | 263 | 284 | 5.4e-10 | 38.9 | 0.023 | 30.0 | 5.0 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 9 | zf-H2C2_2 | 277 | 300 | 0.0 | 184.2 | 2.4e-07 | 0.00032 | 20.8 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 9 | zf-C2H2 | 290 | 312 | 1.6e-30 | 103.5 | 0.00077 | 1.0 | 9.8 |
| pfu_aug1.0_106465.1_49604.t1 | 9 | 9 | zf-C2H2_4 | 290 | 312 | 3.8e-21 | 73.7 | 0.041 | 55.0 | 4.4 |
| pfu_aug1.0_106465.1_49604.t1 | 7 | 7 | zf-H2C2_5 | 290 | 312 | 5.4e-10 | 38.9 | 0.00091 | 1.2 | 9.4 |
| pfu_aug1.0_106465.1_49604.t1 | 10 | 10 | zf-H2C2_2 | 305 | 314 | 0.0 | 184.2 | 0.5 | 670.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_106465.1_49604.t1 | gi|241714213|ref|XP_002413501.1| | transcriptional repressor CTCF, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_106465.1_49604.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_106465.1_49604.t1 atgaattacgtccttattgtatcaaatccagatcatgagaaagacgaccccaatctcttaatgccgtcagggttagaggc catggatatcaaaggggaacaaccctgggaggtcgattttgtggaagaggatggaacggtgaagaaattaattcgtttga taagtcctgatgcagatgggcagttattggcttgtagattttgtagttacacaactaccaaaaaggctctgctgatgaga catatgaaaactcattctaatgaaaaaccgcacaaatgtacgatgtgcgatagagcatttaagactttggcttcgttaca aaatcatcataacactcatacaggcgttcgtccacataaatgtaagcaatgtgaggcggctttcaccacgtccggagagc ttgttcgtcatattcgatacaaacacaccttcgagaagccacataaatgtacagagtgtgactatgcctcggtagagttg agcaaacttaaacgacacatgaggagtcatacaggagagcgtccatatcactgcccacattgtaattacgcctccccgga cacctacaaattgaagcgtcatctgcgtatacacaccggagaaaaaccgtaccagtgtgaaatatgtggggctaaattta cgcagagcaacagtctcaaagcacatcgactgatccactcaggaaacaaacctgtttatcagtgtgaattgtgtccaacg acttgcggacgaagaacggaccttaagatccacatgcagaaattacattcctcggaaaaacctctacaatgcaagaagtg cttgcaggaatttcctgatcggtattcgtataaaatgcacattaagactcatgaaggcgaaaaatgcttcaggtgtgacc agtgtgattatgcggcatattccatgaggttactggaaagtcacgtacttacacacacaggtattcatttatgcttattt gtaaatcagttcaaatgctttcttctttaa |
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Protein
| Protein ID | pfu_aug1.0_106465.1_49604.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_106465.1_49604.t1 MNYVLIVSNPDHEKDDPNLLMPSGLEAMDIKGEQPWEVDFVEEDGTVKKLIRLISPDADGQLLACRFCSYTTTKKALLMR HMKTHSNEKPHKCTMCDRAFKTLASLQNHHNTHTGVRPHKCKQCEAAFTTSGELVRHIRYKHTFEKPHKCTECDYASVEL SKLKRHMRSHTGERPYHCPHCNYASPDTYKLKRHLRIHTGEKPYQCEICGAKFTQSNSLKAHRLIHSGNKPVYQCELCPT TCGRRTDLKIHMQKLHSSEKPLQCKKCLQEFPDRYSYKMHIKTHEGEKCFRCDQCDYAAYSMRLLESHVLTHTGIHLCLF VNQFKCFLL |
|