Gene
| Gene Model ID | pfu_aug1.0_10648.1_10173 |
|---|---|
| Locus | scaffold10648.1 : 6496 ... 53361 : + |
| To GenomeBrowser | scaffold10648.1:6496..53361 |
| Genes list of scaffold | scaffold10648.1 |
| Synonym | pfu_aug2.0_753.1_11164 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10648.1_10173.t1 | 8 | 1 | EF-hand_1 | 209 | 229 | 1.3e-13 | 49.1 | 0.18 | 390.0 | 0.7 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 1 | EF-hand_6 | 209 | 227 | 3.2e-15 | 54.5 | 0.22 | 470.0 | 1.1 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 1 | EF-hand_8 | 211 | 229 | 1.6e-19 | 69.2 | 0.16 | 340.0 | 0.9 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 2 | EF-hand_6 | 229 | 245 | 3.2e-15 | 54.5 | 0.035 | 73.0 | 3.6 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 2 | EF-hand_8 | 229 | 246 | 1.6e-19 | 69.2 | 0.00028 | 0.6 | 9.7 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 2 | EF-hand_1 | 230 | 246 | 1.3e-13 | 49.1 | 0.0015 | 3.1 | 7.3 |
| pfu_aug1.0_10648.1_10173.t1 | 4 | 1 | EF-hand_7 | 232 | 241 | 3.3e-21 | 75.1 | 0.26 | 550.0 | 0.8 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 3 | EF-hand_6 | 338 | 364 | 3.2e-15 | 54.5 | 0.00028 | 0.59 | 10.1 |
| pfu_aug1.0_10648.1_10173.t1 | 4 | 2 | EF-hand_7 | 339 | 399 | 3.3e-21 | 75.1 | 1.0e-06 | 0.0022 | 18.0 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 3 | EF-hand_1 | 341 | 362 | 1.3e-13 | 49.1 | 0.021 | 44.0 | 3.7 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 3 | EF-hand_8 | 351 | 399 | 1.6e-19 | 69.2 | 1.2e-06 | 0.0026 | 17.3 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 4 | EF-hand_1 | 384 | 398 | 1.3e-13 | 49.1 | 0.21 | 440.0 | 0.6 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 4 | EF-hand_8 | 480 | 496 | 1.6e-19 | 69.2 | 0.51 | 1100.0 | -0.7 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 4 | EF-hand_6 | 485 | 511 | 3.2e-15 | 54.5 | 1.5e-05 | 0.032 | 14.0 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 5 | EF-hand_1 | 485 | 512 | 1.3e-13 | 49.1 | 1.5e-06 | 0.0033 | 16.6 |
| pfu_aug1.0_10648.1_10173.t1 | 4 | 3 | EF-hand_7 | 485 | 544 | 3.3e-21 | 75.1 | 2.5e-11 | 5.3e-08 | 32.8 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 5 | EF-hand_8 | 498 | 545 | 1.6e-19 | 69.2 | 4.5e-06 | 0.0096 | 15.5 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 6 | EF-hand_1 | 520 | 545 | 1.3e-13 | 49.1 | 0.11 | 240.0 | 1.4 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 5 | EF-hand_6 | 521 | 547 | 3.2e-15 | 54.5 | 0.14 | 290.0 | 1.8 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 6 | EF-hand_8 | 591 | 613 | 1.6e-19 | 69.2 | 0.089 | 190.0 | 1.7 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 6 | EF-hand_6 | 600 | 627 | 3.2e-15 | 54.5 | 6.0e-06 | 0.013 | 15.3 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 7 | EF-hand_1 | 600 | 626 | 1.3e-13 | 49.1 | 2.5e-05 | 0.053 | 12.8 |
| pfu_aug1.0_10648.1_10173.t1 | 4 | 4 | EF-hand_7 | 600 | 658 | 3.3e-21 | 75.1 | 2.7e-10 | 5.7e-07 | 29.5 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 7 | EF-hand_8 | 613 | 659 | 1.6e-19 | 69.2 | 1.3e-08 | 2.7e-05 | 23.7 |
| pfu_aug1.0_10648.1_10173.t1 | 7 | 7 | EF-hand_6 | 641 | 658 | 3.2e-15 | 54.5 | 0.08 | 170.0 | 2.5 |
| pfu_aug1.0_10648.1_10173.t1 | 8 | 8 | EF-hand_1 | 641 | 661 | 1.3e-13 | 49.1 | 0.018 | 38.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10648.1_10173.t1 | gi|115889630|ref|XP_790246.2| | 4.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_10648.1_10173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10648.1_10173.t1 atgccatatggagtatttgaatttggatttagtgacaacgattctgaaaaccttatcatacaagttgattactggtatct tgatgatatcctaactattgacaattctgcctttgaattatataagaatgatatatatccacaagaattaacatttaaca aggcaaacgttacaaatacagaaacaccatttttggacctaaatagcaaaattgtaaacggaaagattcatacaaatgta tatgacaaaagagatgattttggattcaacatagtaattttacccttgcttaacgagtacattacttttggtattacacg acctgccttttatggtgatatgataaacaaaattagaaggatcaaaggtaggcagcataatcatcgaaaatgcttcagaa tcatcaaacgccttttatacagtggatatgacccttatgtcaccagaagaacacgaggccgtgtcaaaacctttttagag aagacagggccccgaccatctatcctctctgaatgtcagtcggactcttcgggtgataacatacagaagttcgcgtctgc agagcaccgattgtactacgttcatgagagaatcaaagaaagaataacaactggattccatgggctcaaacatttgttca aagctaatgatccagccggcaaagggactgtgtcaaggaataactttgataacaaagatcatatttcctttgatgagttc gtcagctgcttcaaagaaaatgagactgtacagaaggagtggatcagtcccacacagaggctggatattgaggaagcctc caagaagaaaggactggaggatacactgaaacataaagacatgctggtgtatgatccttacatatcggctccgtacgctg ataaaatattcaaggaaaaagtcactacagtatttcagaatggtttaagttggcccatgccgtcgggtgctatgacacca gaggagttagaggcccggcttatagacctgcttcacggagatttcattaaactcatcacctttttcaagtcatgtgataa atacaaccttggagtgattacgcaacaagaattccgcagtgctatagacaaacgtctaggatatcctatgtcagagaagc aatgggaacagctgaaatatgatgtaggtaccgacagagacggacttataccgtacaccaagttcttacagctatttgat ataacacctggcagctggaatagaaaggaggagggtgggttacaggtgtaccagatagtacctagtgagatgccacagcc tcctccagtggaaaaactcaaagagaaggcgaagacttacatgcaacctcaggaggaaaagaagaagaaagatgatggac agaaaactgtggctgagatacaaaaacagctggaggatttgttcaagaataaaattcatgtatttgacaaggtcattagt aattgggaaggtctgaagtctatatttaaatacctggataggaacggcaccgctacaattacgatcggagagatgatgga cataatgaagaccatgaactttgacctcacagagagtgaagtcagagagctttgtgaacgttttgacctctacagaaacg gaaggtttcattatttagagttcatgaggtgttactcccaaagaacaccaagtgggaacagcatggccagaagtaaaact atggggtataacaaatacagtcataaactagagcagaagcaaagaaatataaagtcagccaccgttggtaaagttataca catgatgagagaaaagttgatgtcagaacataagaatcttcgacgtgcattcagaaagttggatacgcagcgacaaggtt tcctcggggtcggagatttcaaaaaggccttaacgagctgtggagtgcaggtcactaacgaagatttctaccacttattg tgcgagtttgaccaccatatgaggggaaggatttcttataatgactttttgaaaacattcatggatgtttattaa |
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Protein
| Protein ID | pfu_aug1.0_10648.1_10173.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10648.1_10173.t1 MPYGVFEFGFSDNDSENLIIQVDYWYLDDILTIDNSAFELYKNDIYPQELTFNKANVTNTETPFLDLNSKIVNGKIHTNV YDKRDDFGFNIVILPLLNEYITFGITRPAFYGDMINKIRRIKGRQHNHRKCFRIIKRLLYSGYDPYVTRRTRGRVKTFLE KTGPRPSILSECQSDSSGDNIQKFASAEHRLYYVHERIKERITTGFHGLKHLFKANDPAGKGTVSRNNFDNKDHISFDEF VSCFKENETVQKEWISPTQRLDIEEASKKKGLEDTLKHKDMLVYDPYISAPYADKIFKEKVTTVFQNGLSWPMPSGAMTP EELEARLIDLLHGDFIKLITFFKSCDKYNLGVITQQEFRSAIDKRLGYPMSEKQWEQLKYDVGTDRDGLIPYTKFLQLFD ITPGSWNRKEEGGLQVYQIVPSEMPQPPPVEKLKEKAKTYMQPQEEKKKKDDGQKTVAEIQKQLEDLFKNKIHVFDKVIS NWEGLKSIFKYLDRNGTATITIGEMMDIMKTMNFDLTESEVRELCERFDLYRNGRFHYLEFMRCYSQRTPSGNSMARSKT MGYNKYSHKLEQKQRNIKSATVGKVIHMMREKLMSEHKNLRRAFRKLDTQRQGFLGVGDFKKALTSCGVQVTNEDFYHLL CEFDHHMRGRISYNDFLKTFMDVY |
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