Gene
| Gene Model ID | pfu_aug1.0_10661.1_46251 |
|---|---|
| Locus | scaffold10661.1 : 14897 ... 28315 : - |
| To GenomeBrowser | scaffold10661.1:14897..28315 |
| Genes list of scaffold | scaffold10661.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10661.1_46251.t1 | 2 | 1 | DUF4527 | 471 | 513 | 1.1e-06 | 28.2 | 0.58 | 1200.0 | -1.6 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 2 | DUF4527 | 507 | 589 | 1.1e-06 | 28.2 | 5.0e-10 | 1.1e-06 | 28.2 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 1 | SH3_1 | 737 | 776 | 1.7e-06 | 27.2 | 0.00028 | 0.59 | 9.5 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 1 | SH3_9 | 738 | 779 | 1.4e-13 | 50.1 | 3.5e-06 | 0.0074 | 15.8 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 1 | SH3_2 | 738 | 781 | 6.6e-12 | 44.7 | 7.8e-06 | 0.017 | 14.6 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 2 | SH3_1 | 828 | 875 | 1.7e-06 | 27.2 | 1.0e-05 | 0.022 | 14.1 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 2 | SH3_9 | 829 | 878 | 1.4e-13 | 50.1 | 2.3e-11 | 5.0e-08 | 32.4 |
| pfu_aug1.0_10661.1_46251.t1 | 2 | 2 | SH3_2 | 841 | 880 | 6.6e-12 | 44.7 | 1.0e-09 | 2.2e-06 | 27.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10661.1_46251.t1 | gi|33468681|emb|CAE30409.1| | 3.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10661.1_46251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10661.1_46251.t1 atggaacagacagtttatcacctacaaaatgttgtgaaccaagcatccctcaaaaagggtgcagatagtcacagaaaaga ttatgaagcattacagaatggattgcttcaaatcgcagagtcaatcaagattctgcaacagttattagggcagtatcaag aagaggaaattgataacttagatcaaataaccccagaccgtactcacctctcttatgcacggtttaacggagagagatgc ggtccccacacagacagaagaaccagaggtcagaaggttgtaatgtccaaagttcatggacgccctgtacagaaactggc caatcagatggtcaatatggaatacaagggtagagaactcttggatgaccaatccgatgccagtacagtagaagaagaac caatggtaaagcaggtacagggtaaaaccaatatgccacacacaagaaaagttgccaaaagttcaaaaggtcatcccagg caggatggaccaatcagcagtgaaggaaaggctgaaatgtacatgcccccggaagaagcccattggatggaggtggaatc cagactccttccattggacaatggacgatggatccaggttggcaaggcaacaggtgtacaaagtaaagctccagaaaggt cccataacacacatgatcaagaattagtacttggattaacacttgcatcagaaagcgaagaaagctttgatgcccagaat gacacagattccagtatgtggagtccggtacaaaaacgcagaaaatttcgctcggtacacggcaccactgacaaacagga aaggatactgccccaaaaatcatcatcatctacattagccaatcatctacatagttacgcaacagattccatgagtgagg gtggggatgccacgcccacttacctgtcagatgataacagagagggtgtggtcccccagggtatggtaggatatatggac ggcagcctccctgatagcggcctggggaccacatctctgacatctacaggaaaacaatcatacctgagggaaaaactagc agctataggtcgtacattagaaaagcagtcattaatgcaagaagctaatgatgaaactgaaagtgaagaaaatatcacaa tgcaacaactaacaaatgccaacagggagataaaaaatctcaaagaaaagatcaatacgatggaaagagatttggagaga aaaacccaatacatcacaatgcttgaaaatttcatggataaacttcatcaacttcttagtcaaaagaatgagaagtcaga agctgaggtgatactatcaatagaggcagagtttcagaagacaatggaggaagtcagaggccttgatctgaggaagtctg aacattcagaggatttaccaagtctcaatgctctgttagacaagagagaaagagaactaaaggctaagaccagtgaagtg gacagtcttttacaagagttaaaacagtggcaggatgaatgtcgtacaatagaggacatgagaacaaacgccttggatgc ggtacgagtcctggaaatggaggtggctaacctgcacagggctgagaaagaactcaaacactccaaggaggcgtatagta ctctcaatcaagagactgagtcaatagagcgcactaaagaagatgccttaatggctttggcaccactcaaagccagaatc aaccatttgtctcagaagtgcagagaaaaggacagtttattgaggaggcttggtgaggagttgaggaggacaaaggaagg aggacaggaccagaggacagtcctcgaggagttatctactatggaacagaggatggagcaggaggagtacaacactcaat actccactctgcctagcatgtccagaggaagcagacgacaaaagtatagaggagtgacggcctcaatgacggacctggac gatacgtcatcaacgtcctccgtaatagacggtcaggaaaatgtcgcttatagcgatacagaaactctacatagaggtca catgggcaaaatgcgtaataggcgacatgacgcaccctggaacattagaactacgaaaggatatagcagaagtttacctc atatccatcatttacacaaacgaagaggagattcctttagtgctaaacctttacccgtgggtcacatgccccctgacccc atgtttgtggccgtagtggactatgaccctgacctttactcaaggagtggccgtagagaggcagagttgaccttgaagga atgggatcaggtcaaggtcataggcccccttgatgagaccgggtactatgaggctgtcagtaatggtttacgaggtctgg tccctgctgcatacctcagaccagccagtctgtccgatgtggaccatcgatcatggactgccaacagaccaacagtccat cctcacctcaactctagtccggagagaataatacaagtccatacacagcttcagcaatcacatagtcctcaaaatcatgg tatctatgactttgtaccgtcaccaggaaagaacgtggacagtgagttgatcttccaagctggagaccatataacggtgt atggtgaagagagaatggatggatattactatggagagatcaatggtaaacgaggtttagtgcctggattcttcatggag gagataccagcatcaagcaatgaaacttga |
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Protein
| Protein ID | pfu_aug1.0_10661.1_46251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10661.1_46251.t1 MEQTVYHLQNVVNQASLKKGADSHRKDYEALQNGLLQIAESIKILQQLLGQYQEEEIDNLDQITPDRTHLSYARFNGERC GPHTDRRTRGQKVVMSKVHGRPVQKLANQMVNMEYKGRELLDDQSDASTVEEEPMVKQVQGKTNMPHTRKVAKSSKGHPR QDGPISSEGKAEMYMPPEEAHWMEVESRLLPLDNGRWIQVGKATGVQSKAPERSHNTHDQELVLGLTLASESEESFDAQN DTDSSMWSPVQKRRKFRSVHGTTDKQERILPQKSSSSTLANHLHSYATDSMSEGGDATPTYLSDDNREGVVPQGMVGYMD GSLPDSGLGTTSLTSTGKQSYLREKLAAIGRTLEKQSLMQEANDETESEENITMQQLTNANREIKNLKEKINTMERDLER KTQYITMLENFMDKLHQLLSQKNEKSEAEVILSIEAEFQKTMEEVRGLDLRKSEHSEDLPSLNALLDKRERELKAKTSEV DSLLQELKQWQDECRTIEDMRTNALDAVRVLEMEVANLHRAEKELKHSKEAYSTLNQETESIERTKEDALMALAPLKARI NHLSQKCREKDSLLRRLGEELRRTKEGGQDQRTVLEELSTMEQRMEQEEYNTQYSTLPSMSRGSRRQKYRGVTASMTDLD DTSSTSSVIDGQENVAYSDTETLHRGHMGKMRNRRHDAPWNIRTTKGYSRSLPHIHHLHKRRGDSFSAKPLPVGHMPPDP MFVAVVDYDPDLYSRSGRREAELTLKEWDQVKVIGPLDETGYYEAVSNGLRGLVPAAYLRPASLSDVDHRSWTANRPTVH PHLNSSPERIIQVHTQLQQSHSPQNHGIYDFVPSPGKNVDSELIFQAGDHITVYGEERMDGYYYGEINGKRGLVPGFFME EIPASSNET |
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