Gene
| Gene Model ID | pfu_aug1.0_10673.1_31949 |
|---|---|
| Locus | scaffold10673.1 : 13936 ... 36936 : + |
| To GenomeBrowser | scaffold10673.1:13936..36936 |
| Genes list of scaffold | scaffold10673.1 |
| Synonym | pfu_aug2.0_71.1_03556 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10673.1_31949.t1 | 1 | 1 | DUF3350 | 154 | 194 | 6.6e-13 | 48.4 | 1.2e-15 | 1.9e-12 | 46.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10673.1_31949.t1 | gi|332218940|ref|XP_003258617.1| | PREDICTED: TBC1 domain family member 1 isoform X3 [Nomascus leucogenys] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_10673.1_31949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10673.1_31949.t1 atgaaatgtcacaactgttctgtggttgatgagattatggcagtattgagatctgcatttcagagtgcatatgaacaaaa tagacagcagatctgtatcatgtgccctttacatcagctacatagactatgtcaggaaatcaatggattgtctccccatg atgcctatgatctgctgatgcgtcgcctacataacttaccggagaaagacacagctgatatatttgctgctgttaaggga aatgataattccgaggtttttggcttcatctcacgtgaaaaggggaacacctttatttgtcatctgatgaaatgtcacaa ctgttctgtggttgatgagattatggcagtattgagatctgcatttcagagtgcatatgaacaaaacagacagcagatct gtattatgtgtcctttacaccagctacatagactgtgtcaggaaatcaatgagaagtctgagagtgaacaaagcacctca cctgaaaagaaaagaagtcctgacgagatcagaacgctatggaaaaaggcaattctacaaaccctgctactcatacggat ggagaaagagaaacaagatataaaagctcgtcaaaatgaggctgtgcagtctcctacgctggactatgaagaaatcactc cgtgtctaaaggaagtgaccaagacttgggaggagatgctgaccagcgctgaccgagacaacgcccaggtcaatccccag acactgctggactgtgtcaaacagggagttcccaagatgcaccgcgggaatatttggtggttactggtagagcagcatag attacattaccctggtatacaggacaagacgccatcaaaggaatatggagaactgctgagggatctcacagagtaccaac ataatattcttatagatttagatttaatactcatgcagggagctgaggttttactgaaggttgctgtagcgttacttggt aaccataaagaactcatactccagtgcgactcttttgagacaattgttaatttcctcaagtcaacattgccagagatggg aatcattcagatggaacgagtcataaatcaggtatttgatatggacatcaccaagcagttacaggcctatgaggttgaat accatgtgctccgagaagaaatgctctactcacccagtaaaggagacacagatacgatacaaaaacttgaagaaatgaac aaaaatctcaaacaacaaaatgtagatctgctagaaaaacttcagcatatccacagtcatcaacgaagcctcgagattac gatacataacttacaaacgaacgaagggaagctcaaatctcacataaaaaccttagaaatagaacgcaaggcattgttaa atgtagttactaagttacggactctcatatcagaggatgattttaagggcttggacattttgttgccgcccctctcgcca agtttaccatcttcccctgtacgtcattccaacactaccttaagcaataaaaaatctgatggaccaaaaagtgtgcttaa aaagactttgtccaaaagcttgagctctcctctggagaaagagattcaggaaataggatcaaagaactttcagtttgaat ga |
|
Protein
| Protein ID | pfu_aug1.0_10673.1_31949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10673.1_31949.t1 MKCHNCSVVDEIMAVLRSAFQSAYEQNRQQICIMCPLHQLHRLCQEINGLSPHDAYDLLMRRLHNLPEKDTADIFAAVKG NDNSEVFGFISREKGNTFICHLMKCHNCSVVDEIMAVLRSAFQSAYEQNRQQICIMCPLHQLHRLCQEINEKSESEQSTS PEKKRSPDEIRTLWKKAILQTLLLIRMEKEKQDIKARQNEAVQSPTLDYEEITPCLKEVTKTWEEMLTSADRDNAQVNPQ TLLDCVKQGVPKMHRGNIWWLLVEQHRLHYPGIQDKTPSKEYGELLRDLTEYQHNILIDLDLILMQGAEVLLKVAVALLG NHKELILQCDSFETIVNFLKSTLPEMGIIQMERVINQVFDMDITKQLQAYEVEYHVLREEMLYSPSKGDTDTIQKLEEMN KNLKQQNVDLLEKLQHIHSHQRSLEITIHNLQTNEGKLKSHIKTLEIERKALLNVVTKLRTLISEDDFKGLDILLPPLSP SLPSSPVRHSNTTLSNKKSDGPKSVLKKTLSKSLSSPLEKEIQEIGSKNFQFE |
|