Gene
| Gene Model ID | pfu_aug1.0_10700.1_68235 |
|---|---|
| Locus | scaffold10700.1 : 1 ... 6542 : + |
| To GenomeBrowser | scaffold10700.1:1..6542 |
| Genes list of scaffold | scaffold10700.1 |
| Synonym | pfu_aug2.0_1164.1_14827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10700.1_68235.t1 | 1 | 1 | TYW3 | 1 | 77 | 6.4e-21 | 74.4 | 2.7e-24 | 9.9e-21 | 73.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10700.1_68235.t1 | gi|50540288|ref|NP_001002611.1| | tRNA wybutosine-synthesizing protein 3 homolog [Danio rerio] | 2.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10700.1_68235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10700.1_68235.t1 ctgagctgtgctgttggtgctggatttaggaactctgggatcagcatcggaaataagggaaaattcattgttggtgtaag aagtacacactccttggaagttcccatatcatcaaatggtcacttgctggtacaagatcattatttgcagtacctagttg aactagctaacaagaaactggcagaaaactttcagagaattaacagatttttccaaaatgtgaaagactcggtggaaagc tgttcaaagatggaaagatgccaaggaaagtctgacaaaagaagtaaaaaacttgaaacaaagaaggataacttagattc ctctgttattacccaaaccacaaattcctctgtagagaagaataacttagtagaagatatggacttgacgtcattaaacc tgtttgatatgctagatgctacctaa |
|
Protein
| Protein ID | pfu_aug1.0_10700.1_68235.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10700.1_68235.t1 LSCAVGAGFRNSGISIGNKGKFIVGVRSTHSLEVPISSNGHLLVQDHYLQYLVELANKKLAENFQRINRFFQNVKDSVES CSKMERCQGKSDKRSKKLETKKDNLDSSVITQTTNSSVEKNNLVEDMDLTSLNLFDMLDAT |
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