Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10704.1_24777
Locus scaffold10704.1 : 657 ... 14642 : +
To GenomeBrowser scaffold10704.1:657..14642
Genes list of scaffold scaffold10704.1
Synonym pfu_aug2.0_680.1_01037

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10704.1_24777.t1 gi|91094211|ref|XP_972733.1| PREDICTED: uncharacterized protein LOC661485 isoform X1 [Tribolium castaneum] 1.0e-15

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_10704.1_24777.t1
Definition-
>pfu_aug1.0_10704.1_24777.t1
atgaatgtgtgcaatgtgatagcggcgtttgttttccttatcttatggtacacgctggttgtttttacaacatggcttat
gtttttggcgtacatttttgtcgtctgcagctcgcagtgtttctggagttttcttgaattcgctcggaattttatgtcta
taacattggtgtttggcaaccttacaactggtcaacttgacttacttaagcgcagagatgataacatacaatgccagttc
gctgttgataacatggaaaatctgattgagaatcagatcaactcatcagaaaatgaaaattcaaaggataaccaaccaaa
agatacaaaaaatacacaaatgatcaaggagaaagatcgaccaataataaacggcgttacaaatacagcagatgcgaata
attattcaggaaaggtgactgatttacggctagaaaccgttaagaataaaacgacatggcagcagatgtcacctagacga
gaacgtaagttaggtcgtcagaacagtagctccagtggaagtagcgggagtggggccagcgctagtgggggtagtaactc
aaatagtgtgggcagtaacagtattggaagtaacggttcactatcacctacgggtagccccaccaagtcatggaaaacga
tcaaggaatccaataaaaacaacattttatcatggaaagatttatctcccaccaagattgcacaaaataagaacgaaaaa
gttgacagtgaaacttctgatgtgaataagcttgaggataacgcgcgacagctaagtccaaccaagaaatgtcccggcgc
aaacgaaatacaattggataataaagtgcaatgtagcccggaacatgcgcattgtaggtcagcggcaaacattaccggca
caccgtctgaaaagactgccagaagtccagaacacaagtgcaagtccatgtgcaaccaagtgaacggtaaagttaatcag
aacgaaattaataaacagctaagtccggaacattgcgtcgggaaacataaagacttatgtagaaatgctagtggtgctac
agatgataatgattatttctacgatgaggattttacagttcagtttgatactaacttgagagagtcgtccccaggtctga
attgcacgtgtgttgacccctctatggtggtggattttcctcatatgatcacgggaagttatctgagctttaacgacatg
aaggggtcttgtgtgcttgaaccgacaaattcacaggaactgttttgtcctgatgagtccgagttatcttcctgcaggaa
ttctgcaatggatatgtcatcgagtgaacgcgagatgatgtgttctagtgatatgctagattttagtgataatccaattt
tcacgccgtcaccaacaagagatttaaacggacaaaatgtctcaacggatagtcttgataggaaaataactcacggtcat
gctcctgggtgccaaaacagcatggagctgtccacaagcagaacttctagtgatggaaacctgtgtgtaaattgttgtcc
gagaaaagaagagtatttcctatcatttgatggttcgcatggccgctcagggtcaacctctgacaatgataattcgttga
catcgattgggtcaggccaaggtcattgggtacaaaattcctccggagagggtatcgcagaagagtgttcagatagtttc
cacttttgttacatgatgaatggaaatcagaatttaccattaccgagtcacaagaagaagagatttcactctctaaaggc
tgtgcaagaaaattcacttgaggaaggagatttcactgaggatgactcgagagaagcttcgccatctcgaaggatagagt
caagtaaagcggcatcgttcccacacaggactttaccacaagttaaaggctcatcgccgccaaggacaagctcaagtaga
agttcttcgttacgatcaaggaaaccatcgaaaaatgttacatcctggaagcaagtcaaaagtttgaaaaaactcggaaa
acttgagtcggactttgatccaacaagaagcaacagtatgcctgaactgtattatgaagcatggcattctttctcgtcac
aagactgcagggaccttgcaaaaatcgctgagagttttcatggaaagagacactcagcatatcttgttgatctttaccag
cgcgtaagaaatcagtcaaatcctgtttcacctgatactatgtccaacatagagcagattctgttccaccctcttatcgg
tagatgccaaggagagcaaaatttgactgtccaggaatccaaatgttgtggggtttgtggtcacaagaaggacgattcgc
atagtagccacactcttacaaacagcaatgttcagcagttaatgaactcaaatcgccatggtcaacaaatggactattat
actcagaaaaggattctagaatggctcgaacgagataaaatagaaggtcataataagtcaaaaagctgtcaaactaaaaa
ggaagtgaaaacagcagagacaatcatttctccgacaactgtgactctttggtgcgggacgaaaaactttggctctcagt
ttccaccttgcacaaaggattgcggtatccaagcagaagttgatggaacgaaagataacttagcaaacgtggaacagcag
acgtctgctacgatatcggaaatgagaaaaaccgaactgaatgactgtggtcagcagacctcgcctactatagacaagaa
tgaaatcttgtctttgctaccagagacatttaaagagttagatgatataatgccaaaacgggctacggataaatgtctca
aaaaaggccgacagattcctagatcgaaaagtgctgacccaaaattactacaaaatcatcacgaacaaggcatgggtagt
ctatcttactattcatacaaatctttaccggaattaaactttttgtcgcaaagaccagaattggaccacaatgaacatct
gtccatctttgacccgcttcctgttcagatgccaattcccgtgtttatacctactaccgacctatctaaatccaaggaat
ctatagtggagaagatccagcaggttagtgggcataaatcccggcaaaaaattgagcctcataatggaaaatcgtacaaa
agatctaagtctgcaccgggtaaattgtcaaaccccaatctgctcaaacatattggtgaatcggcctcaagcagcagtgg
tttcagtacaagttctacttcatctggcatcgatcctggatattctagtgaatccagggcttgtcagaatggaagtcctt
caaatgacattgaacgcttgttgttctttcctccgcatttagttgtctctgctaaggacaagcagcccgaggagacaaag
gccaaaatacctcaacttgcacagcaaggaaatttacagcatgcaaaacttcaaaggctctcagaaaagaaagtcagcaa
atatgcaaatgagtctcatccaagtactattgatatgaggctcaagcttaaggtttccccaaattcaaacgaggctaatc
aaggcacaagcaataagtcagcatcagatcccaacttacacttacaacacctcgatgctcttcaggaggagaataccccg
gtatcttcgccagatcagcattgtcatcataaatgttgtaatggaagtgactgcttctatgccttcgatagacctacgta
cagcattgaattaggacaaaactactttgaaggatacgaaaatgagcatttggtattacgtagaaaatttgattaccact
gccaagtttcaagcgaatctggatcctccactagtagcggatgcgttcccaagatgaacaagaaaccgttgaaatcatgt
cttaggaaaaagcatattctgaggtcaagatctctatcagaccagttcaaccttgcacagcaagcggagttacagaaaca
gaaaaggaagctgaatcgccactcatatgcatgtgaggaggtgtacctgctgacggacgagtctggacaatattatttat
gtcacagtgacaatatgtcacagggcgaggaggagtctgaaccagagcccaccgtgttcaccacagagaatatagaagga
aaagtagcagatcaacaacaaccagtgaagatgcgccggaagaagacacaagagaacactggtacaagtgatggcgagaa
ggacaacctgagcgggaagaggaaaagtgtcagttttgcatctgaggtgtcttttcacgctatcagtccgcagatgtcac
ccaagaaccacggtaacctcaacaattgtgatgatatggaccaagaggtggacgtggagagcatagagggtgattgtaca
gtatccactgaggagaacccctctgacgagtctgatgtaccaccacaggaattcaagctttcccctactcaggtggagca
ggtctacgatgaacgattcatacagttagagaggaaaaaagggccatatacaagagctatccatgacctggttcaacagc
tgaaaagtaatccgagcctcctttccagccataccaagtttgaggctttcctatttggacttctcaatttacgtctgttg
gactactggatgggatatctacgttacaactgcagccttacagaaaaattctacaatgtagatggcgtcatcatcctggg
aaaatcctgtcatgagagagcttacgatgagatgctgatagctttacagccccttgctgttctacctttccagcttggta
tcgagtatgtcatacagcattcaacatttcagcatcgctcaccatcaaacagcccaattaagaacaagccctcaccagga
caaggcnccatgacagagtcgttctctggcattgcacaaaaattattgggaattagttccagtagggagaagttgaatgt
tgatagtgacaaaacaaatagctcaacagtgaaagtagcacaaatggaagaggacttgtctgaagaaaatgcaaagcaac
tgaataggcaaacctcattggaagccgtgtccaacaaggcaaaatcaagtttgatcaagctgtttgataagctattacta
tcaaaggaaactgctcagccatcaacagaagctactgaaaataagaaatcttccagctggaacttcggttttaatcagaa
tcgttcacctgtgtcaaagattcctaccagcaagagcctctctcctgtcaatagcagtcattctggtaacacacatagca
cttctgatagtaaaggaaaatatcctacaaaagcaaggccagaaaatgtggtagcaaaaagtatccaaaaggaagcaaag
agaaccagcaaagcccctgaaacaaagaaacagcaagctgtaattaattcactacttagcaaagaaaaggtacaatcaaa
gaggaatgacaacactccagcatcaccaactaaaaccatcacaaagcaaataaaaccatctacaaggagtgcaatcccta
ctccacttgacagcccagattacaaccagacaaagaaggtggataaatccaaaatcagcaaaattccaacattgagaggt
tccccttcaatttcttctgtaaaacgaagagagaaatctggagcaagcagcaaaattccaaagagatacagtttagtgct
ggacagttctggctccgaattggggtcaccaaattctagtgctcttagttcaccagtcaaggtcaggcattccaaatctg
cagatgctatgtccggcatacctactgcctctgttagttctccaacaaggaaatacagaactaacaaagagaaactttct
ccgccaaccgaacaaaaacctccagtattcaaaaccatggaaaatgctgaaataagaaatagtatcgagctggttaaact
tggacagaaatttgataagggatgtgatgttgaaaatattaaagtatgcaaaaaggaaaatgaactggctgaaggtggaa
agatttccaatgaaaactcagatataacatcttcaaatgagcaatgtgcttctctagaacttggacctactttagttgtt
cccccttccattcgtgattccttggagaaaggtgattttacaagaaatctctcaatgccaaataaagaagctgctgattt
ttccaaaccagtcaagtctgtccctgtaacaaagccctctcctgaaaggaaaccctctcctgttgataccaagagtgcta
gagacgttgagctggatattaattctaattcacccttatctatgaatagtggtaaaaatgtgcaggcggacaaaggggag
caatcaagtggtttgttggaaaagcaagaatgtggtgccaaacagaacgactcaggagacttctctaaaccaaacttcag
atatatccagaccttgcagacctttgattcatcagagccgtcacagctttcctacaggcaaggtgagcattatgaggtcc
tagctcagatagactctagctggttctactgtgtaaacggtgggcgagagggactgattcacacggaggcagtcaaacct
ctaacagaccgagacgaatttgaaatgctccatgacagcttctattcgtga

Protein
Protein IDpfu_aug1.0_10704.1_24777.t1
Definition-
>pfu_aug1.0_10704.1_24777.t1
MNVCNVIAAFVFLILWYTLVVFTTWLMFLAYIFVVCSSQCFWSFLEFARNFMSITLVFGNLTTGQLDLLKRRDDNIQCQF
AVDNMENLIENQINSSENENSKDNQPKDTKNTQMIKEKDRPIINGVTNTADANNYSGKVTDLRLETVKNKTTWQQMSPRR
ERKLGRQNSSSSGSSGSGASASGGSNSNSVGSNSIGSNGSLSPTGSPTKSWKTIKESNKNNILSWKDLSPTKIAQNKNEK
VDSETSDVNKLEDNARQLSPTKKCPGANEIQLDNKVQCSPEHAHCRSAANITGTPSEKTARSPEHKCKSMCNQVNGKVNQ
NEINKQLSPEHCVGKHKDLCRNASGATDDNDYFYDEDFTVQFDTNLRESSPGLNCTCVDPSMVVDFPHMITGSYLSFNDM
KGSCVLEPTNSQELFCPDESELSSCRNSAMDMSSSEREMMCSSDMLDFSDNPIFTPSPTRDLNGQNVSTDSLDRKITHGH
APGCQNSMELSTSRTSSDGNLCVNCCPRKEEYFLSFDGSHGRSGSTSDNDNSLTSIGSGQGHWVQNSSGEGIAEECSDSF
HFCYMMNGNQNLPLPSHKKKRFHSLKAVQENSLEEGDFTEDDSREASPSRRIESSKAASFPHRTLPQVKGSSPPRTSSSR
SSSLRSRKPSKNVTSWKQVKSLKKLGKLESDFDPTRSNSMPELYYEAWHSFSSQDCRDLAKIAESFHGKRHSAYLVDLYQ
RVRNQSNPVSPDTMSNIEQILFHPLIGRCQGEQNLTVQESKCCGVCGHKKDDSHSSHTLTNSNVQQLMNSNRHGQQMDYY
TQKRILEWLERDKIEGHNKSKSCQTKKEVKTAETIISPTTVTLWCGTKNFGSQFPPCTKDCGIQAEVDGTKDNLANVEQQ
TSATISEMRKTELNDCGQQTSPTIDKNEILSLLPETFKELDDIMPKRATDKCLKKGRQIPRSKSADPKLLQNHHEQGMGS
LSYYSYKSLPELNFLSQRPELDHNEHLSIFDPLPVQMPIPVFIPTTDLSKSKESIVEKIQQVSGHKSRQKIEPHNGKSYK
RSKSAPGKLSNPNLLKHIGESASSSSGFSTSSTSSGIDPGYSSESRACQNGSPSNDIERLLFFPPHLVVSAKDKQPEETK
AKIPQLAQQGNLQHAKLQRLSEKKVSKYANESHPSTIDMRLKLKVSPNSNEANQGTSNKSASDPNLHLQHLDALQEENTP
VSSPDQHCHHKCCNGSDCFYAFDRPTYSIELGQNYFEGYENEHLVLRRKFDYHCQVSSESGSSTSSGCVPKMNKKPLKSC
LRKKHILRSRSLSDQFNLAQQAELQKQKRKLNRHSYACEEVYLLTDESGQYYLCHSDNMSQGEEESEPEPTVFTTENIEG
KVADQQQPVKMRRKKTQENTGTSDGEKDNLSGKRKSVSFASEVSFHAISPQMSPKNHGNLNNCDDMDQEVDVESIEGDCT
VSTEENPSDESDVPPQEFKLSPTQVEQVYDERFIQLERKKGPYTRAIHDLVQQLKSNPSLLSSHTKFEAFLFGLLNLRLL
DYWMGYLRYNCSLTEKFYNVDGVIILGKSCHERAYDEMLIALQPLAVLPFQLGIEYVIQHSTFQHRSPSNSPIKNKPSPG
QGXMTESFSGIAQKLLGISSSREKLNVDSDKTNSSTVKVAQMEEDLSEENAKQLNRQTSLEAVSNKAKSSLIKLFDKLLL
SKETAQPSTEATENKKSSSWNFGFNQNRSPVSKIPTSKSLSPVNSSHSGNTHSTSDSKGKYPTKARPENVVAKSIQKEAK
RTSKAPETKKQQAVINSLLSKEKVQSKRNDNTPASPTKTITKQIKPSTRSAIPTPLDSPDYNQTKKVDKSKISKIPTLRG
SPSISSVKRREKSGASSKIPKRYSLVLDSSGSELGSPNSSALSSPVKVRHSKSADAMSGIPTASVSSPTRKYRTNKEKLS
PPTEQKPPVFKTMENAEIRNSIELVKLGQKFDKGCDVENIKVCKKENELAEGGKISNENSDITSSNEQCASLELGPTLVV
PPSIRDSLEKGDFTRNLSMPNKEAADFSKPVKSVPVTKPSPERKPSPVDTKSARDVELDINSNSPLSMNSGKNVQADKGE
QSSGLLEKQECGAKQNDSGDFSKPNFRYIQTLQTFDSSEPSQLSYRQGEHYEVLAQIDSSWFYCVNGGREGLIHTEAVKP
LTDRDEFEMLHDSFYS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495