Gene
| Gene Model ID | pfu_aug1.0_10706.1_39097 |
|---|---|
| Locus | scaffold10706.1 : 5886 ... 12981 : + |
| To GenomeBrowser | scaffold10706.1:5886..12981 |
| Genes list of scaffold | scaffold10706.1 |
| Synonym | pfu_aug2.0_242.1_07220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10706.1_39097.t1 | 3 | 1 | Ig_2 | 61 | 111 | 3.1e-18 | 65.6 | 0.0011 | 2.1 | 8.5 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 1 | Ig_3 | 62 | 98 | 4.9e-13 | 49.3 | 0.023 | 43.0 | 4.7 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 1 | I-set | 74 | 111 | 2.8e-20 | 71.9 | 5.9e-05 | 0.11 | 12.3 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 2 | I-set | 125 | 186 | 2.8e-20 | 71.9 | 2.4e-07 | 0.00045 | 20.0 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 2 | Ig_3 | 129 | 185 | 4.9e-13 | 49.3 | 2.7e-09 | 5.0e-06 | 26.9 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 1 | C2-set_2 | 130 | 155 | 5.4e-06 | 26.2 | 0.00018 | 0.33 | 10.8 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 2 | Ig_2 | 131 | 197 | 3.1e-18 | 65.6 | 4.5e-10 | 8.3e-07 | 29.0 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 1 | V-set | 131 | 162 | 6.2e-07 | 29.3 | 0.13 | 240.0 | 1.6 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 1 | ig | 132 | 183 | 1.4e-07 | 31.4 | 4.7e-05 | 0.086 | 12.9 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 3 | Ig_3 | 204 | 285 | 4.9e-13 | 49.3 | 4.5e-06 | 0.0083 | 16.6 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 3 | Ig_2 | 208 | 289 | 3.1e-18 | 65.6 | 1.5e-08 | 2.8e-05 | 24.1 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 2 | C2-set_2 | 209 | 249 | 5.4e-06 | 26.2 | 5.9e-05 | 0.11 | 12.4 |
| pfu_aug1.0_10706.1_39097.t1 | 3 | 3 | I-set | 215 | 292 | 2.8e-20 | 71.9 | 2.9e-12 | 5.4e-09 | 35.7 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 2 | V-set | 215 | 290 | 6.2e-07 | 29.3 | 8.2e-09 | 1.5e-05 | 24.8 |
| pfu_aug1.0_10706.1_39097.t1 | 2 | 2 | ig | 219 | 284 | 1.4e-07 | 31.4 | 1.5e-05 | 0.027 | 14.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10706.1_39097.t1 | gi|241862297|ref|XP_002416368.1| | irregular chiasm C-roughest protein, putative [Ixodes scapularis] | 8.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_10706.1_39097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10706.1_39097.t1 atgtgggaaaattttgagaaattccatgacgccacaatgcaatttcgatatttgaccaagattcgaagcttgtttgtccg agaatctagtcaagtaaatcccttcatttgtagtttttgcttcatacgtttcaatatcattaccaatatacatcttttaa gttttgtcttctacatgacttgctagtggtaccgtaacaatgctctgatacaaggtgaaaacaaagactacctggatata cgcagtataggaccagagtatgacaaaaacaagataaaatgtgaagccactaactcaataggtgttgcctccgaagaagt tcagctcacggtactatatggtgcctactttaccggtgtgaggagatacattccggttgacattggtgacagaaatgtta agttagaatgcatagcggagggaaatcccaaaccgagccttatctggcgcaaaaaagggaaagacaactaccagccgctt agcactaactctatttataccattccttacgtcatgccctctagtattggagcctatgtatgtacggccacatcagtcaa tactggatttcctgatgtcagcgtggaagtccatttgcttttgaaaggaccacctgagataataagtgaaactcagcagt atgctgctccggaggacacggtgtcggtggaatgtgtggccaggtctgtacctgagggaaccatagagtggtaccgaagt aacgaaaaaataacgtacgccgagtcagggagatatacccacacctatacaccaatggctgatggcctgaaagacacgct acatatcaaggattttcatgattctgatttcggggaatataattgtaccgttatcaatagtcggggaaacgatagcttgg tcattgtgctccttgaaaaagattcctacgcagagacagatagtaacacagagatcagaaaacgggacaaaacggaatcg cctttagacttcggaaaatcaacgttaatggatcagtggagacaggacttaaattatcagtgtccatcagattatgatga agtatataataaggatcccagattacctagtagtaactacggaacgttaaaatctgacaattttataaatgcatatgaaa atcataacggacacttattcagtgactatacacatagaggggatgaaacgtttcctacagaaaatacaaatggttacaca aatggaacatatgggaccagttcctttagaagtgcttctcgaactgattttgtgaaaccagtcgaatatactgatccata tggatatagactgcctccagcagacaattctactacacaattagctacaaatgtataa |
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Protein
| Protein ID | pfu_aug1.0_10706.1_39097.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10706.1_39097.t1 MWENFEKFHDATMQFRYLTKIRSLFVRESSQVNPFICSFCFIRFNIITNIHLLSFVFYMTCXWYRNNALIQGENKDYLDI RSIGPEYDKNKIKCEATNSIGVASEEVQLTVLYGAYFTGVRRYIPVDIGDRNVKLECIAEGNPKPSLIWRKKGKDNYQPL STNSIYTIPYVMPSSIGAYVCTATSVNTGFPDVSVEVHLLLKGPPEIISETQQYAAPEDTVSVECVARSVPEGTIEWYRS NEKITYAESGRYTHTYTPMADGLKDTLHIKDFHDSDFGEYNCTVINSRGNDSLVIVLLEKDSYAETDSNTEIRKRDKTES PLDFGKSTLMDQWRQDLNYQCPSDYDEVYNKDPRLPSSNYGTLKSDNFINAYENHNGHLFSDYTHRGDETFPTENTNGYT NGTYGTSSFRSASRTDFVKPVEYTDPYGYRLPPADNSTTQLATNV |
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