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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10709.1_02965
Locus scaffold10709.1 : 1 ... 16360 : +
To GenomeBrowser scaffold10709.1:1..16360
Genes list of scaffold scaffold10709.1
Synonym pfu_aug2.0_524.1_14265

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10709.1_02965.t1 1 1 Ax_dynein_light 139 236 3.4e-08 33.5 9.1e-12 3.4e-08 33.5

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_10709.1_02965.t1
Definition-
>pfu_aug1.0_10709.1_02965.t1
tattaccagagattcgatcaagcactaatgctatagataagacaaagccactgcctacatccctacagagtgactttata
ccggaggatgtattgtttgctcttacacaacctcctcctgcaaaagatcaacttggtccaccaacccgctccaggaattt
gaatacatcaatggttcaagcacgagctcctcctcagaatttatggaatcacaagagacgagaaagatttaaacatctca
cagagaacaccccatgtttatgtggtgcaggaagtgatatttccttcctgtacgatgtccctcaaccggagaagaagcta
gagagaccagataaaatagataaaagccatgccagaaaggaggctatggatagacagaaaaagatgcacaacttactaga
attgatcaaaaaagagcagaatatctacaactcagtttttcatgaagtcatcagacaaacaagtgtggaatgtgtagaga
gaggagaattactagcagatctgcgtaaaaaatacagtgacctgctgaataaagtacctcaacagatcaaaagtttacat
gaagaagttatggcacagagggcattggacagaaggcttactgaagaactgatgagatttaagggaacaattagtatact
tactagtgagctggcctcagttaaagaacacgacagaaaagtaactaaagaagcccaagatgctagggaagagttgaaac
ttgccttgtccgagtctcagaagaatgccagcttgttagcagaatatcatgatctttatgaacttcagaggaaacgatta
gaaagctcggtctttatgttaacagaggaaagagaactgtggagtaatgctgcctatagtctggcactgaaggaggttga
tactcttctgagacaatttaacaacagaattactggggaaaatggtgtggctccacatgcaatacgcctgatgcatggtt
tggaatcgtgggaactgaagttgacttccagtctgaacggcacttttacaatcaacgacaatgaatggggtgcgctgtgt
caattaatggaggaatggatgggctgcgtagatgatgctgtacagtacgtaggctcgactcagcgtgacgatgatcggac
ggaaaataaaccacatgtcag

Protein
Protein IDpfu_aug1.0_10709.1_02965.t1
Definition-
>pfu_aug1.0_10709.1_02965.t1
LPEIRSSTNAIDKTKPLPTSLQSDFIPEDVLFALTQPPPAKDQLGPPTRSRNLNTSMVQARAPPQNLWNHKRRERFKHLT
ENTPCLCGAGSDISFLYDVPQPEKKLERPDKIDKSHARKEAMDRQKKMHNLLELIKKEQNIYNSVFHEVIRQTSVECVER
GELLADLRKKYSDLLNKVPQQIKSLHEEVMAQRALDRRLTEELMRFKGTISILTSELASVKEHDRKVTKEAQDAREELKL
ALSESQKNASLLAEYHDLYELQRKRLESSVFMLTEERELWSNAAYSLALKEVDTLLRQFNNRITGENGVAPHAIRLMHGL
ESWELKLTSSLNGTFTINDNEWGALCQLMEEWMGCVDDAVQYVGSTQRDDDRTENKPHV

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