Gene
| Gene Model ID | pfu_aug1.0_10722.1_10190 |
|---|---|
| Locus | scaffold10722.1 : 18760 ... 20285 : - |
| To GenomeBrowser | scaffold10722.1:18760..20285 |
| Genes list of scaffold | scaffold10722.1 |
| Synonym | pfu_aug2.0_303.1_10588 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10722.1_10190.t1 | 1 | 1 | DUF1637 | 35 | 231 | 0.0 | 172.9 | 0.0 | 0.0 | 172.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10722.1_10190.t1 | gi|260817942|ref|XP_002603844.1| | hypothetical protein BRAFLDRAFT_101346 [Branchiostoma floridae] | 4.00001e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10722.1_10190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10722.1_10190.t1 atggcttctatgatccataaagcagtatctacagcgttgaaaacattttcccggacttctcaaagagtatcaaacgaaga tctgtctgctgtcaagtccgctttgtctcaaatacgttcaaaggacatcaattttgacgagaaacttgtctcaaaaggtt acgagggagaggatcctgataatgtagctccctgcacatatattgaaattctagaggatcaaaatgtatcaatcggagtg tttgttctacgcaatgccagcattccattgcatgatcatccagggatgtttggtctgtgtaaagtaatcagcggcaaaat ggcagtaacaagttacagtttgttgaaggatgagaatgaagtcctcccatctaacctgcgaattaaccttccaagacaat tcataaaacctgtgatacctaaaggtgaaaccacattatcaccagaggatgaatgttgtgttctatcaccagaggaagga aacattcacgaaatcagtccaatagatggaccagcagcattcctagacatcttagcaccaccgtatgatcatgagactgg aaaaagagtgtgtcattactatcagacaataggcatggagaagtctaaagatagaggagacattatgtggttaggacaag caggacagcccagagatttttggtgtgacactgcaccatatcttggacctgaattataa |
|
Protein
| Protein ID | pfu_aug1.0_10722.1_10190.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10722.1_10190.t1 MASMIHKAVSTALKTFSRTSQRVSNEDLSAVKSALSQIRSKDINFDEKLVSKGYEGEDPDNVAPCTYIEILEDQNVSIGV FVLRNASIPLHDHPGMFGLCKVISGKMAVTSYSLLKDENEVLPSNLRINLPRQFIKPVIPKGETTLSPEDECCVLSPEEG NIHEISPIDGPAAFLDILAPPYDHETGKRVCHYYQTIGMEKSKDRGDIMWLGQAGQPRDFWCDTAPYLGPEL |
|