Gene
| Gene Model ID | pfu_aug1.0_10772.1_53586 |
|---|---|
| Locus | scaffold10772.1 : 22446 ... 33125 : + |
| To GenomeBrowser | scaffold10772.1:22446..33125 |
| Genes list of scaffold | scaffold10772.1 |
| Synonym | pfu_aug2.0_1750.1_01808 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10772.1_53586.t1 | 3 | 1 | Pkinase_C | 74 | 117 | 3.1e-09 | 37.2 | 2.1e-13 | 3.1e-09 | 37.2 |
| pfu_aug1.0_10772.1_53586.t1 | 3 | 2 | Pkinase_C | 138 | 151 | 3.1e-09 | 37.2 | 0.63 | 9300.0 | -2.8 |
| pfu_aug1.0_10772.1_53586.t1 | 3 | 3 | Pkinase_C | 181 | 198 | 3.1e-09 | 37.2 | 0.42 | 6300.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10772.1_53586.t1 | gi|89886145|ref|NP_001034817.1| | ribosomal protein S6 kinase beta-1 [Xenopus (Silurana) tropicalis] | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_10772.1_53586.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10772.1_53586.t1 atggcgggagtgtttgatctagaacttcatgataccccggacggggaggaagagatctcggatgacgagtattttgagcc agacattcagatattaaaagccaaacttagtttacctccatatttgaccaacgaagccagaggacttatcaaaaagttac tgaagaagtctccacaagagaggctaggaggggcagcagatgatgccaaaccaataaagacaagtgaggaggacgtcagt cagtttgacactaagtttacacgacagacccccgtagactccccagatgacactgtcctcagtgaaagtgccaacagagt gttcctaggattcacatatgtagctccctcagttttggatgagctgaacaacaagccgtggatagagaaggagccccgat caccacgtaaacctggattcaggggggctatgagcccacatcagagtagtctggtagaggggttccgagtggctggtcac ataaatggaacggaagaaatggaagccatggacacgacaacgatggttataccaaaacgatctacgtcccccgcaatcgc caccaaaaacacagccttcaaacaagctgccttccctggtagtcaaaatagacccccacatctacgcatgaattga |
|
Protein
| Protein ID | pfu_aug1.0_10772.1_53586.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10772.1_53586.t1 MAGVFDLELHDTPDGEEEISDDEYFEPDIQILKAKLSLPPYLTNEARGLIKKLLKKSPQERLGGAADDAKPIKTSEEDVS QFDTKFTRQTPVDSPDDTVLSESANRVFLGFTYVAPSVLDELNNKPWIEKEPRSPRKPGFRGAMSPHQSSLVEGFRVAGH INGTEEMEAMDTTTMVIPKRSTSPAIATKNTAFKQAAFPGSQNRPPHLRMN |
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