Gene
| Gene Model ID | pfu_aug1.0_10775.1_53587 |
|---|---|
| Locus | scaffold10775.1 : 5346 ... 16055 : + |
| To GenomeBrowser | scaffold10775.1:5346..16055 |
| Genes list of scaffold | scaffold10775.1 |
| Synonym | pfu_aug2.0_47.1_23327 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10775.1_53587.t1 | 1 | 1 | RVT_1 | 241 | 397 | 1.2e-16 | 60.7 | 5.0e-20 | 2.5e-16 | 59.7 |
Transcript
| Transcript ID | pfu_aug1.0_10775.1_53587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10775.1_53587.t1 atgcgtcaaaatcaccttttataccgtgaatgtgatcctaatgtcaccagactgacaatcatcatggagtctgttgcagc tacatctgtgaagggtcactctgattttcagaaattcatgatgaaagtggctaacacgttgcacatcgaagcagagaata ttacctccgatgcggcagaatataaatcctacgtctctaatcggttagtatcgcagtccgataaagtttcgcgatctggt cttccatttgatggtgcaattttgaatgcactctctgaagtggaccaagagtttcaaaagaagggatcgattaagactaa ccgaacatcagatgatgataagtatttggtcactagggagcattttgaaaaattttgctctacaccaaaacttgatgaaa atattgaagaaggcactgtgaatgttggtcgtaaatcttcaagaaaatctgtgtacacgtttaagaacagccaactcaaa tcacgaaacaatgagttttggaagattgaccaagcagctcgcttgatgcttcgagaattatcttacagttcgcttatcgt ttcatatctggactctgttcagtcacaggaggaaaagactggggggcttcgtgcacttatgtccgtaatgatgtccatgg ctgacgtttcattgttgggtcggttgcagcaaggaggtcgattcacattgatgacctttccttcaagaataaggctactg aaaaagaaggacggcggttatcgtccaatattgaatctaagaccgttaaacaagtacctaaaggtgcaacatttcaagat ggaaacattacggtccataattcaagctctggaaaagggagattgggtggcatcgttggatctaaaggatgcatatcttc atgtaccagtgtttccaccgcaccgcatatttctccgattttgcatcaacaatcgccattatcagtttcgctcaatgcct ttcgggctagcgatagctcccagaatttttacaaagatagtgacaactataggaggctaccttcgcatgaaagacattta catctacatgtatctagacgactggttaatcaaaagcagagaacctatcagccttctctcacacctattcacaacattac acaaactaatcgacttgggtcttgtagtgaacctagagaaatcacatctcaatccatctcagaagataactgatctggga gctcggttcaatctacaaatgggaatagtttgtccaaccgtggaacgttataccaatttatgccaaactatttctactat tacccagcaggcttttgtttcggcccgttcatttctccgaattttgggccttatggcttcatgcatagatttagtacacc tagcgagactacacatgcgacccatccagctatacctcttgtgccattggtctccgagacagggcgacatatcgcatctc gttcagatcaaggactccctgaagcctcacttggcatggtggacccaggggtcaaacattttcagggggggcagtactgg aacagaggcttccagattacacaatgtggacggatgcctccaatcaaggctggggagcccatatgggcaatcagagtgta tcgggaatatggacactttcggacaaagcaaaacacataaacttcctggaaatgttagcagtgcagaaagcacttactca cttcaggaaccccttaataggcaaacttctcatgataaggaacgacaactcgacagtggtgtcttacatcaatcgacaag gggggacgaggtctcctcagttgtgcatgttagtgaggacaatttatcaatggtgcatggaatggaacattcagatcaaa gcagctcacattccgggcaagaaaaatgtactggcagacagtttgtctcgagggaatgtgaaagtgaaaataacagagtg gagcctgtgtcaaacaatagcagatcagctcttcaacatttatacaaaaccaaacatagacttgtttgcaacaagagaaa atcgcaaaattcagatattctgctccccgtatccggagccggaagcttggaattgcgacgctctggcgtgcagttggacg gggatttacgcatatgcatatatatgttagatatactatataatggtggcgtgtcaagttatcataccctgcaacttgtt atcaattcagagatatggggcgctgtccatgcccactcagttgctaattctgaatttatagaatctacaggcgttgctgt agttcaagctaatgctggtgatgacgtgtttgtgaagtcacacaatggtgatattgtcagtaataaatttgccaaaacat tctttgcaggctggaagctgtaa |
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Protein
| Protein ID | pfu_aug1.0_10775.1_53587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10775.1_53587.t1 MRQNHLLYRECDPNVTRLTIIMESVAATSVKGHSDFQKFMMKVANTLHIEAENITSDAAEYKSYVSNRLVSQSDKVSRSG LPFDGAILNALSEVDQEFQKKGSIKTNRTSDDDKYLVTREHFEKFCSTPKLDENIEEGTVNVGRKSSRKSVYTFKNSQLK SRNNEFWKIDQAARLMLRELSYSSLIVSYLDSVQSQEEKTGGLRALMSVMMSMADVSLLGRLQQGGRFTLMTFPSRIRLL KKKDGGYRPILNLRPLNKYLKVQHFKMETLRSIIQALEKGDWVASLDLKDAYLHVPVFPPHRIFLRFCINNRHYQFRSMP FGLAIAPRIFTKIVTTIGGYLRMKDIYIYMYLDDWLIKSREPISLLSHLFTTLHKLIDLGLVVNLEKSHLNPSQKITDLG ARFNLQMGIVCPTVERYTNLCQTISTITQQAFVSARSFLRILGLMASCIDLVHLARLHMRPIQLYLLCHWSPRQGDISHL VQIKDSLKPHLAWWTQGSNIFRGGSTGTEASRLHNVDGCLQSRLGSPYGQSECIGNMDTFGQSKTHKLPGNVSSAESTYS LQEPLNRQTSHDKERQLDSGVLHQSTRGDEVSSVVHVSEDNLSMVHGMEHSDQSSSHSGQEKCTGRQFVSRECESENNRV EPVSNNSRSALQHLYKTKHRLVCNKRKSQNSDILLPVSGAGSLELRRSGVQLDGDLRICIYMLDILYNGGVSSYHTLQLV INSEIWGAVHAHSVANSEFIESTGVAVVQANAGDDVFVKSHNGDIVSNKFAKTFFAGWKL |
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