Gene
| Gene Model ID | pfu_aug1.0_108.1_50633 |
|---|---|
| Locus | scaffold108.1 : 57126 ... 62458 : + |
| To GenomeBrowser | scaffold108.1:57126..62458 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug2.0_4.1_13357 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_108.1_50633.t1 | 1 | 1 | FAM183 | 16 | 120 | 2.0e-35 | 121.6 | 3.3e-39 | 2.4e-35 | 121.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_108.1_50633.t1 | gi|291234482|ref|XP_002737174.1| | PREDICTED: protein FAM183B-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_108.1_50633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108.1_50633.t1 atggcaaaacaagagaaggaaccccttaattttgttcaccaaaatgcaattttatgcgaaacaattacaaaggaacaacg acatcaaaaattgtacacaaattacagtgtaaatccattcaaaaaaatacatgtgatcacaggaaaaccaaactccaaac acgatacagaagaaggggaagaagatagtcatttcaaaaatgttattaagcgtgccaatcaagaacctgttaagaagtat gtgtatccccagacagaggctcaggaagtgggatggataaccaaaccattgattgatatagaccgttcagatagacgcct gcatttcttcagacagaatactcccatcacaaaatacatggatgccgcatggagggtgaaagaacaaacggaaaatatga actaa |
|
Protein
| Protein ID | pfu_aug1.0_108.1_50633.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108.1_50633.t1 MAKQEKEPLNFVHQNAILCETITKEQRHQKLYTNYSVNPFKKIHVITGKPNSKHDTEEGEEDSHFKNVIKRANQEPVKKY VYPQTEAQEVGWITKPLIDIDRSDRRLHFFRQNTPITKYMDAAWRVKEQTENMN |
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