Gene
| Gene Model ID | pfu_aug1.0_108.1_50635 |
|---|---|
| Locus | scaffold108.1 : 77346 ... 82942 : + |
| To GenomeBrowser | scaffold108.1:77346..82942 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug2.0_4.1_13355 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_108.1_50635.t1 | 1 | 1 | Dioxygenase_C | 33 | 201 | 1.6e-28 | 99.2 | 5.7e-32 | 2.1e-28 | 98.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_108.1_50635.t1 | gi|260827102|ref|XP_002608504.1| | hypothetical protein BRAFLDRAFT_92414 [Branchiostoma floridae] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_108.1_50635.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108.1_50635.t1 atggagaagctgtacttcgtgttgtttttggtgaaagtagtacagtcagttgatggccaggaatctgagtcagtatgtcg tccgactccccatgacattgttggaccttactatttccctcgtcctccccctctaatacagtactgtaccggcgatccgg agagccatcgcttagagaacatgattgtccgtggtcacgtgtacaaggctgattgcctcacgccgctccctcgggtcaga attgaggtgtggcaggcggaccatgctggggtgtatcagttttccacacagtgcagaggatttattcgtacagacgcgtt gggatattacgaattttcgacaattcatccgggacaatatactattgaccgacaaaacttgatgtatcggccatcgcaca tccacttccgggttttcggtcgtcgtcgtcataaaggtctgattacgcagctttattttgcgggagatccgtatttgggg aggaacgactcatgttccatttgctcctcgggaaatccagatctgatcaaacaaccgaagcaactgtgtgacgatgcgga caagtattgtatggacgtagtggactttgacattgtattagagcgaggcagcggtacttctgtgacgcaagaaggtccaa atgacatcacggagtag |
|
Protein
| Protein ID | pfu_aug1.0_108.1_50635.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108.1_50635.t1 MEKLYFVLFLVKVVQSVDGQESESVCRPTPHDIVGPYYFPRPPPLIQYCTGDPESHRLENMIVRGHVYKADCLTPLPRVR IEVWQADHAGVYQFSTQCRGFIRTDALGYYEFSTIHPGQYTIDRQNLMYRPSHIHFRVFGRRRHKGLITQLYFAGDPYLG RNDSCSICSSGNPDLIKQPKQLCDDADKYCMDVVDFDIVLERGSGTSVTQEGPNDITE |
|