Gene
| Gene Model ID | pfu_aug1.0_1080.1_00599 |
|---|---|
| Locus | scaffold1080.1 : 90561 ... 99965 : - |
| To GenomeBrowser | scaffold1080.1:90561..99965 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug2.0_1871.1_05284 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1080.1_00599.t1 | 1 | 1 | AAA | 600 | 719 | 8.2e-15 | 55.1 | 1.6e-17 | 1.6e-14 | 54.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1080.1_00599.t1 | gi|260830569|ref|XP_002610233.1| | hypothetical protein BRAFLDRAFT_130765 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1080.1_00599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1080.1_00599.t1 atgactgccagagcacgaagagcgactttgttggccaaagattacaaggatgacagacatagactacatttacaaataag tcggttacatgcaaatattctagaagcaaccacagacagacatacatttcatgttgcggttgtaggaaagagaattcctc cagagaaacgagtgtcctctgctgtgtccacacccccatccgccctatcatcagggggttactcttcccctatttattcc tttgacagactttcatattcgggtagtcagtgttctacatcctgcagtcaaaaacattttgaatcggatgatgatttgag caatgatagcgtagaaatactttcaactgttcatatttatgagcatgacacaactaaatccagagacgaagagattttga tcacttgcagttatgatttcctctcccattatcagcttgaccatgagaatgatattcatgtcaaaatggtgaatttattt ccggtacaaaagatggtcataggagtatttaatgacttcgatttatttagcaaactacaaagagagaaattttgtcgtga cctgttactggaggtctgtcagacgtcagttttacttaggtccaacgatttatttcttgcttctagtcccaaaatattgt atgaagagaacagtgatgatacaagtagaaacaacagtgatctacatgtgatagaatgctgtccaatccgacatggtatt ttaacacttgatacagaattaatcttttcatgcttggaagatgagggtgtaagacagaaagaatttttatttacccttcc gcgtagtttatccaaagaaaagaaagacctttttcttgtctcagacttctgcaagcctatgaaaggaccatctttgcagt cttcattttcatattcgagagattcgagtccgttgacagctgatgagtttgacattaattttgagtgcattgaacagcag gtgttatggctacggctgctttgtaaaccacagaatgacgccttgtttgatccaatgtatgtgataggcatgtccaagga aacaatgctcaaatacgcactctttgaagaaagtcttgtgaaagtttctctgagcataaaaattcctgttgtagcatcaa gaattgctatgattaagtgtgtttgtgttaatatgctcccaaatgaagataaagtgtatatttcaccactgctcaaattc aaccttcaaaacaatagctgtgctatgtctttggacatctctgaagtcttaaaaattgagcgcctgaaagaggctgcaga aagtgacgttgaccttgggaccgtcagcacttccttacacacagacctacctgtggcagaggaagtcatcatatcctttg tcatgtcaccatggtatcatccaagcaaagtcagtgtcgaggccatattaagctacttcagtgttccaaggttacttaca aagggtgacattcttccaatacagagcagagatgacccagagtattcctcctcacaaggacctttagagaagcgacagac aaccatattttttaaagttgtcaaaattgtaggcccgaagtcaaactttcccagctacatttgtgacagacttttgacaa agctgattcagcaaggatctgtacacagttatgtacccttggtgatggaaccttaccttatcaagagacccctgacttac tgggatcattgttatcaaaatggtatgaatgagtacgtggaaaaactagagtccctcattaggccccatctgcacaatag gctggattttaccaatatgaaggacgttttaccgtcagtgatgttgataggagcctctggatgcggtaaaactacaacta cctatacagtagccaggaggctgaaccttaatgtactcaaggtaaattgtcacagtttatatggtgaggcccctgctgct atagaagccaggatattcaacattgtcagtgaagctattaattactccccctgtatactgctgttacacagtatccatgc cctgggtaaagacaaggaaaggaacagtgatgatccgcgagtggcgagtgcttttagagcaagtataaagaggttaatgg aggagcacagtgaataccctgtagttgtcgtgggaacgacccactcccccgcagtgctggctgctgatatacacgaggca ttcttacattctgtcaacatagagggttatgttctgggagatttggtggcccttgtttctcatgcggcaagaggtgctta taaggcagtcatgaaagactgtttgggaacaaagaaagctttgagttatgaggaggaggaggacctagcatcagctggta ttgtagtacaacatgagaactttgtgacagcaatagatcagctacaggcagctcactctgatactataggggctccaaag tcaaattaccatgacatcactatgacttttaaagacgtcaaattaccatga |
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Protein
| Protein ID | pfu_aug1.0_1080.1_00599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1080.1_00599.t1 MTARARRATLLAKDYKDDRHRLHLQISRLHANILEATTDRHTFHVAVVGKRIPPEKRVSSAVSTPPSALSSGGYSSPIYS FDRLSYSGSQCSTSCSQKHFESDDDLSNDSVEILSTVHIYEHDTTKSRDEEILITCSYDFLSHYQLDHENDIHVKMVNLF PVQKMVIGVFNDFDLFSKLQREKFCRDLLLEVCQTSVLLRSNDLFLASSPKILYEENSDDTSRNNSDLHVIECCPIRHGI LTLDTELIFSCLEDEGVRQKEFLFTLPRSLSKEKKDLFLVSDFCKPMKGPSLQSSFSYSRDSSPLTADEFDINFECIEQQ VLWLRLLCKPQNDALFDPMYVIGMSKETMLKYALFEESLVKVSLSIKIPVVASRIAMIKCVCVNMLPNEDKVYISPLLKF NLQNNSCAMSLDISEVLKIERLKEAAESDVDLGTVSTSLHTDLPVAEEVIISFVMSPWYHPSKVSVEAILSYFSVPRLLT KGDILPIQSRDDPEYSSSQGPLEKRQTTIFFKVVKIVGPKSNFPSYICDRLLTKLIQQGSVHSYVPLVMEPYLIKRPLTY WDHCYQNGMNEYVEKLESLIRPHLHNRLDFTNMKDVLPSVMLIGASGCGKTTTTYTVARRLNLNVLKVNCHSLYGEAPAA IEARIFNIVSEAINYSPCILLLHSIHALGKDKERNSDDPRVASAFRASIKRLMEEHSEYPVVVVGTTHSPAVLAADIHEA FLHSVNIEGYVLGDLVALVSHAARGAYKAVMKDCLGTKKALSYEEEEDLASAGIVVQHENFVTAIDQLQAAHSDTIGAPK SNYHDITMTFKDVKLP |
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