Gene
| Gene Model ID | pfu_aug1.0_10813.1_24800 |
|---|---|
| Locus | scaffold10813.1 : 30396 ... 41328 : + |
| To GenomeBrowser | scaffold10813.1:30396..41328 |
| Genes list of scaffold | scaffold10813.1 |
| Synonym | pfu_aug2.0_2030.1_01960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10813.1_24800.t1 | 1 | 1 | Gemin6 | 14 | 173 | 3.79752e-43 | 146.6 | 0.0 | 4.80645e-43 | 146.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10813.1_24800.t1 | gi|260830290|ref|XP_002610094.1| | hypothetical protein BRAFLDRAFT_60087 [Branchiostoma floridae] | 3.00004e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10813.1_24800.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10813.1_24800.t1 atggcagaagttatcaatggtgatcagcatcctattttcaagtgtgatccagaggaatggatgcagtatgtttataaaca agtacgtgtatctaaggatgacggcacagaggctacaggatgggtgtacactattgatcctgtgactcaaagcttcgttc ttgtctcatttttggacgacaaatctcaaatggagatggtgatgggaccttcggtacaaagagtgacagtacttgatgaa aattgtgaaacttacaaaaagaaactggacagtttgttcagaaatgaagaagttgcgagcctttcagaagaggaattgga agcaaggaaaaataaactgaagttgtggttgtgtaaaaaccgtctaccagtgcaggtttctgggaacaatggtgagatgt tgtcagtttctgatgctttgttcatagagccaccttacggaccagataactgtagaagcaccaatgaaataattctgggt cgtattcaaggcttgataaagaacatgcctgttgaccaagaagagtggtga |
|
Protein
| Protein ID | pfu_aug1.0_10813.1_24800.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10813.1_24800.t1 MAEVINGDQHPIFKCDPEEWMQYVYKQVRVSKDDGTEATGWVYTIDPVTQSFVLVSFLDDKSQMEMVMGPSVQRVTVLDE NCETYKKKLDSLFRNEEVASLSEEELEARKNKLKLWLCKNRLPVQVSGNNGEMLSVSDALFIEPPYGPDNCRSTNEIILG RIQGLIKNMPVDQEEW |
|