Gene
| Gene Model ID | pfu_aug1.0_108257.1_49622 |
|---|---|
| Locus | scaffold108257.1 : 41 ... 1336 : + |
| To GenomeBrowser | scaffold108257.1:41..1336 |
| Genes list of scaffold | scaffold108257.1 |
| Synonym | pfu_aug2.0_524.1_14261 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_108257.1_49622.t1 | 1 | 1 | Glyco_transf_10 | 22 | 301 | 6.0e-40 | 136.8 | 5.04467e-44 | 7.29999e-40 | 136.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_108257.1_49622.t1 | gi|339244437|ref|XP_003378144.1| | alpha-(1,3)-fucosyltransferase [Trichinella spiralis] | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_108257.1_49622.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108257.1_49622.t1 atggtgcgaattgtaagtttacgaaagagcgtcattttcgcagttgtaatatttgttgcagtttcgatgtttctctgcct tcaaatgctgattttggattgtgatgtgcttgtagaggaaggaatagtactggacagtcagacagaatatatagggcagt gtagatatcaaacagctgataaccggtgtaatgttatactgttccacggaataaaatggtgggaaagcagtattatagag aaatatgatccgtttaataattgtcctgttcaatgtgacataatcactgacgtaaggaaaagcgcaacagccgatgtcgt catcatgcaagctgatacagtgaccaatgaaagccttccaacgaaacaagccaatcagatctgggttctctccgaatatg agagtcctaataacctggaagatgcaaatcgtccgttggttctcaaagatgtgttagatcaatataaacggaagttcaat tggacaatggggtaccgcagagatgcagatttcgttgttactcatggacgcttcgttttgcgggatactatgaattataa ttattcaagccgccttgatcgtcttatgaaaacgaaaaagaaaacatcgacttggttcaattctcattgcaaaactctat cacttagggaaatatacggagatatgttacaaaatcttacacaactcgatattttcggaacatgcggtaaagttctggag gattgcagcccagaagtacgttttaaagaagcttttggattcagcaaagacggtcatggaaaatgtatggacttcataga cgaacaatataaatttttcatgtcgtttgaaaactctttgtgtttggactatgtaaccgagaagtcattacagaaaatca tgccccattacattgtgcccgtgg |
|
Protein
| Protein ID | pfu_aug1.0_108257.1_49622.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_108257.1_49622.t1 MVRIVSLRKSVIFAVVIFVAVSMFLCLQMLILDCDVLVEEGIVLDSQTEYIGQCRYQTADNRCNVILFHGIKWWESSIIE KYDPFNNCPVQCDIITDVRKSATADVVIMQADTVTNESLPTKQANQIWVLSEYESPNNLEDANRPLVLKDVLDQYKRKFN WTMGYRRDADFVVTHGRFVLRDTMNYNYSSRLDRLMKTKKKTSTWFNSHCKTLSLREIYGDMLQNLTQLDIFGTCGKVLE DCSPEVRFKEAFGFSKDGHGKCMDFIDEQYKFFMSFENSLCLDYVTEKSLQKIMPHYIVPV |
|