Gene
| Gene Model ID | pfu_aug1.0_10830.1_31993 |
|---|---|
| Locus | scaffold10830.1 : 18238 ... 30365 : - |
| To GenomeBrowser | scaffold10830.1:18238..30365 |
| Genes list of scaffold | scaffold10830.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10830.1_31993.t1 | 4 | 1 | WD40 | 56 | 80 | 5.4e-16 | 57.7 | 3.2e-05 | 0.16 | 11.9 |
| pfu_aug1.0_10830.1_31993.t1 | 4 | 2 | WD40 | 85 | 122 | 5.4e-16 | 57.7 | 9.1e-09 | 4.5e-05 | 23.1 |
| pfu_aug1.0_10830.1_31993.t1 | 4 | 3 | WD40 | 150 | 166 | 5.4e-16 | 57.7 | 7.1e-05 | 0.35 | 10.8 |
| pfu_aug1.0_10830.1_31993.t1 | 4 | 4 | WD40 | 178 | 210 | 5.4e-16 | 57.7 | 0.00033 | 1.6 | 8.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10830.1_31993.t1 | gi|51950155|gb|AAH82383.1| | MGC81767 protein [Xenopus laevis] | 3.0e-40 |
Transcript
| Transcript ID | pfu_aug1.0_10830.1_31993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10830.1_31993.t1 atgacggacgcggacagacggatcggttttaatgtccccgtgctttcgcgaaagcgggggacatatacacgtacaacagc tagaagtacagggctgcgttctattatgcggaacgttctagaacgatcccattctgacaatggaacgaaaacgttgggcc agctttgtgttagatactgtaatgcttcatcccggtacttgttatgcggtgggagagatcagacatttaccgtatgggac cttaaaagttgccaagtaaagaaaacttacaagaaccacaagggtcccgtgacaactgcattgttcaacaaagatgacac acacattgcatcaggttctcaatcaggagagatcatcgtgtacaatgtcattactggtcagggctgcaagccaatggtgg ctccaaaagtacatgcaatacagcagatcgagtacagcaagacaaagaagtctttgttgggtgcagcctctgatgacgga agtattaatctatgggataccaacacacggcagttgatacacggctttactggcgcccatcgtgcccccgccactgacct ctgcttctctcccataaacgacctcctgcttacgtctgtgggtctggataagagaattattttttatgacttgaaaagta tgaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_10830.1_31993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10830.1_31993.t1 MTDADRRIGFNVPVLSRKRGTYTRTTARSTGLRSIMRNVLERSHSDNGTKTLGQLCVRYCNASSRYLLCGGRDQTFTVWD LKSCQVKKTYKNHKGPVTTALFNKDDTHIASGSQSGEIIVYNVITGQGCKPMVAPKVHAIQQIEYSKTKKSLLGAASDDG SINLWDTNTRQLIHGFTGAHRAPATDLCFSPINDLLLTSVGLDKRIIFYDLKSMK |
|