Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1084.1_65787
Locus scaffold1084.1 : 98646 ... 99611 : +
To GenomeBrowser scaffold1084.1:98646..99611
Genes list of scaffold scaffold1084.1
Synonym pfu_aug2.0_547.1_24161

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1084.1_65787.t1 2 1 PC4 3 33 3.5e-13 48.5 7.3e-09 0.00011 21.3
pfu_aug1.0_1084.1_65787.t1 2 2 PC4 62 103 3.5e-13 48.5 4.2e-10 6.3e-06 25.3

Transcript
Transcript IDpfu_aug1.0_1084.1_65787.t1
Definition-
>pfu_aug1.0_1084.1_65787.t1
atgcgggtagacctccgtgaatgggtaccgccaaacaaacctaccaccaaaggagtctccgttcccttcaaacgatgggc
cagcttaagggaccacctggaactaatagacgaaaaggccaccgccatcttcgatggacaaaatgtagacgagcggatac
acattggcggcaatgtccacgtcagtatcaacaacaagtatccgagagtgcacatccgccacttctggtttccagtagac
tcagacgaacccagagccagcagaaaaggactctccttaaaaccagacgagtggcaaaaattcaaggccacatttcccaa
agttgaagatatggtggatggtgccagtgaggcccaagcatgcatccatgacgatgatcaccagaatcaggagggaatgc
tgcgttgccctgagtactcacccagagattaccaaaattggcaatga

Protein
Protein IDpfu_aug1.0_1084.1_65787.t1
Definition-
>pfu_aug1.0_1084.1_65787.t1
MRVDLREWVPPNKPTTKGVSVPFKRWASLRDHLELIDEKATAIFDGQNVDERIHIGGNVHVSINNKYPRVHIRHFWFPVD
SDEPRASRKGLSLKPDEWQKFKATFPKVEDMVDGASEAQACIHDDDHQNQEGMLRCPEYSPRDYQNWQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495