Gene
| Gene Model ID | pfu_aug1.0_10880.1_39119 |
|---|---|
| Locus | scaffold10880.1 : 1 ... 10118 : + |
| To GenomeBrowser | scaffold10880.1:1..10118 |
| Genes list of scaffold | scaffold10880.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10880.1_39119.t1 | 1 | 1 | FNIP_N | 9 | 112 | 2.6e-18 | 66.7 | 9.9e-21 | 4.9e-17 | 62.6 |
| pfu_aug1.0_10880.1_39119.t1 | 1 | 1 | FNIP_C | 142 | 302 | 0.0 | 173.5 | 0.0 | 0.0 | 173.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10880.1_39119.t1 | gi|260802692|ref|XP_002596226.1| | hypothetical protein BRAFLDRAFT_117992 [Branchiostoma floridae] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_10880.1_39119.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10880.1_39119.t1 accagcacccaagttggacccgtcacagattcgcctagtgatctaccatgacagtgaaagttgtcgacagctcatatttg attctaaggcagttaaaagggtggaggaacccaagcgtcgatgcatcagaaaggacaagtcgttggatagtaacaggtgt tcgtttggtagtgatcctgggatatacagaccttgtcactacagaaatggtcccaaatatgagtttttgaagcccggctc tgacgtcaagatgttggaggagatcatgtttggatctgtaggaatggcgtacaagggagcctcagtcaaagtacatttcc tcaggtcagtgacacccacagagttaagtaggcgtcgtcatctctcttccaccagcagcttggactttgatcatatggat ccattggttcattttaaggaactggaaatgccaaacatcgtagacgagacttcaggcagcagcattaagatgtttgatcg taattttggccgttcattgttggcgggtttctcttctcactatctgtcagatttcgttctccatggtacttcagatgcag acttcaaggaaaaaatgtacctggatttacacatggctacacagcattcagtgctggacgagccaatatcggaagctgtg tgtattattgctgacacagacaagtggagcgtagaaatcgctagaacgggcactggtgcgcaacctgtcgtagcgtcaca actagtctgtaatatgctggaaggagtccaacaactctggaagctgaaaatgagctctgaattttgtttgatgcatttag aagaccgtcttcaggagatttatttcaagagtaaaatgttggcagagtaccttaaagacgtgaagagaaatgacgtcaac atgaaagagctcaagaatttattagatgatagtcaacacagtaaaagtattttcattaatattctcaaaataagatacat gtatgtaatatggtttcgtcgtttatttcagtttcgacaccggtga |
|
Protein
| Protein ID | pfu_aug1.0_10880.1_39119.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10880.1_39119.t1 PAPKLDPSQIRLVIYHDSESCRQLIFDSKAVKRVEEPKRRCIRKDKSLDSNRCSFGSDPGIYRPCHYRNGPKYEFLKPGS DVKMLEEIMFGSVGMAYKGASVKVHFLRSVTPTELSRRRHLSSTSSLDFDHMDPLVHFKELEMPNIVDETSGSSIKMFDR NFGRSLLAGFSSHYLSDFVLHGTSDADFKEKMYLDLHMATQHSVLDEPISEAVCIIADTDKWSVEIARTGTGAQPVVASQ LVCNMLEGVQQLWKLKMSSEFCLMHLEDRLQEIYFKSKMLAEYLKDVKRNDVNMKELKNLLDDSQHSKSIFINILKIRYM YVIWFRRLFQFRHR |
|