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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10899.1_02985
Locus scaffold10899.1 : 14128 ... 19935 : -
To GenomeBrowser scaffold10899.1:14128..19935
Genes list of scaffold scaffold10899.1
Synonym pfu_aug2.0_9.1_29938

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10899.1_02985.t1 1 1 GMC_oxred_C 75 219 1.3999e-42 145.3 0.0 2.20004e-42 144.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10899.1_02985.t1 gi|347970613|ref|XP_003436609.1| AGAP013016-PA [Anopheles gambiae str. PEST] 2.00386e-43

Transcript
Transcript IDpfu_aug1.0_10899.1_02985.t1
Definition-
>pfu_aug1.0_10899.1_02985.t1
atgcctggaatgcgagaagccggggcgtttttcaagctatatgaagattctacggcccccgatgtacagatgacgttaca
cagtactgacattacatattcaagacgattcagcttcttagaacttcatgatgaagaggcaaaagaagaaatggagaaca
cagaggaagagatgaaggtagaagggaggaggtttactattggtgtaatggcaccacaacatccccacagtgtaggaacc
attacgttagcgtcacgagatccattcgattatccactcattgacccacagtacctcactgaaaaagctgatattgatat
atttatcagaggagttcgaaaagcacagaacattattgctacgtctccgttcaaaatgttcagtgcaaaagtagttgacg
tagaaattgaccagtgcaagacacacaagtttgacagcgacccctattgggaatgcttggtacgccacctagcattaaca
aattaccacccttcatgtacgtgcaaaatgggggcagcggaagacaagacagcagttgttgatcctgaattaagagttcg
tggactgaagaagcttagagttgtcgatgcctcaatcatgccctttgttacggcatgcaatacaaacgctccagtgatca
tgattgccgagaaagcgtctgatttaatacgaggaatcaaaacagtaaagcctatatcaaagaataaaaataggacttga

Protein
Protein IDpfu_aug1.0_10899.1_02985.t1
Definition-
>pfu_aug1.0_10899.1_02985.t1
MPGMREAGAFFKLYEDSTAPDVQMTLHSTDITYSRRFSFLELHDEEAKEEMENTEEEMKVEGRRFTIGVMAPQHPHSVGT
ITLASRDPFDYPLIDPQYLTEKADIDIFIRGVRKAQNIIATSPFKMFSAKVVDVEIDQCKTHKFDSDPYWECLVRHLALT
NYHPSCTCKMGAAEDKTAVVDPELRVRGLKKLRVVDASIMPFVTACNTNAPVIMIAEKASDLIRGIKTVKPISKNKNRT

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