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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10899.1_02986
Locus scaffold10899.1 : 19993 ... 25600 : -
To GenomeBrowser scaffold10899.1:19993..25600
Genes list of scaffold scaffold10899.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10899.1_02986.t1 1 1 GMC_oxred_N 1 130 5.8e-28 97.8 4.5e-32 6.6e-28 97.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_10899.1_02986.t1 gi|322796408|gb|EFZ18942.1| hypothetical protein SINV_07596, partial [Solenopsis invicta] 5.0e-25

Transcript
Transcript IDpfu_aug1.0_10899.1_02986.t1
Definition-
>pfu_aug1.0_10899.1_02986.t1
tttaccacaacacagctggaccaatcttggtgtcagaactctcaatgactccattggcaaagatgttcctggacgctggt
aaagagatgggttataaagtacatgactgtaacggaaacgacggagaaccagaaggattttgtaagttgcagtcatttac
tggcaatggtttacggtcaagtacagcgagagggtaccttatatctgcatccaaaagacctaatttacatattgcaccta
attctcatgttactaagatattatttactgggaaatctgcaaatggagtccaacttgttagaaatggactgaaagagacc
attaaggcaaagaaggaagtgataatatcagcgggggccgtgtccagtccccaaatactgatgctctcagggtggctccg
ctggaagcatcactga

Protein
Protein IDpfu_aug1.0_10899.1_02986.t1
Definition-
>pfu_aug1.0_10899.1_02986.t1
YHNTAGPILVSELSMTPLAKMFLDAGKEMGYKVHDCNGNDGEPEGFCKLQSFTGNGLRSSTARGYLISASKRPNLHIAPN
SHVTKILFTGKSANGVQLVRNGLKETIKAKKEVIISAGAVSSPQILMLSGWLRWKHH

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