Gene
| Gene Model ID | pfu_aug1.0_109.1_21999 |
|---|---|
| Locus | scaffold109.1 : 11742 ... 22845 : - |
| To GenomeBrowser | scaffold109.1:11742..22845 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug2.0_77.1_23398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_109.1_21999.t1 | 1 | 1 | F-box | 23 | 59 | 7.7e-08 | 31.8 | 6.2e-11 | 1.5e-07 | 30.8 |
| pfu_aug1.0_109.1_21999.t1 | 1 | 1 | F-box-like | 26 | 55 | 1.2e-06 | 28.1 | 1.1e-09 | 2.6e-06 | 27.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_109.1_21999.t1 | gi|260837426|ref|XP_002613705.1| | hypothetical protein BRAFLDRAFT_287976 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_109.1_21999.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_21999.t1 atggcttccatagatgtgttaggcctagactctgacgaaaacacagagaacgaagaaagcgatgaattgtttggtttgcc agaagaattagttgaaaaaattctatcatatatgaccttcaacgaacttgctgaatcaagactcgtctgtaagaggttca acaaatggagtgagcggctacttaacgcaggtttttcaaaagtagacaagctacatgctcaaactcagaagcatgtgaag agccagctacctcgtcgagagtcggagagacgtaaccacaccctggcaagacacgtggatatactgtcagctatagagac cagactctcactactagggatgacgtatatgagatatatagatatgggtctatgctgctttataccaggaaaggttttag atgaattgttccgtatcttgaactcattacaagacactaagcagcctcccagagcccatgagttcctccaggagttacgt gacatatcgtccatggcgatggaacacttcgaggagaagatagctccagccctgaaaaataaaatgccggcggtaactct gccgtttccgtttggggattgcaccagcccagagtcatctcaagctttgtttcaaccagaaaaacaaacagactag |
|
Protein
| Protein ID | pfu_aug1.0_109.1_21999.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_21999.t1 MASIDVLGLDSDENTENEESDELFGLPEELVEKILSYMTFNELAESRLVCKRFNKWSERLLNAGFSKVDKLHAQTQKHVK SQLPRRESERRNHTLARHVDILSAIETRLSLLGMTYMRYIDMGLCCFIPGKVLDELFRILNSLQDTKQPPRAHEFLQELR DISSMAMEHFEEKIAPALKNKMPAVTLPFPFGDCTSPESSQALFQPEKQTD |
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