Gene
| Gene Model ID | pfu_aug1.0_109.1_22000 |
|---|---|
| Locus | scaffold109.1 : 23686 ... 33937 : + |
| To GenomeBrowser | scaffold109.1:23686..33937 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug2.0_77.1_23399 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_109.1_22000.t1 | 1 | 1 | Sulfotransfer_1 | 49 | 287 | 0.0 | 182.8 | 0.0 | 0.0 | 178.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_109.1_22000.t1 | gi|307938281|ref|NP_001182764.1| | sulfotransferase family cytosolic 1B member 1 [Canis lupus familiaris] | 8.96831e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_109.1_22000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_22000.t1 atgcccgaggtcaaattgaccgataaaagtggtgctacaataaccgccctggacattgataatggttacatcattccgac gtttaaggcgttagaaaaccatgaacaacatgttttatccatgcctacgtggaacgcagaaaatgatgacatcttgatat gtgcctaccctaaatcaggaactcattggttatgggaggtgacatgcatgttactaaagggaaaagctgagagaataaag agagtgaaagaagacgtcatgatagagggaatgaccaaagacagatacgagaaagaacccgtaccaagggtcttcaatac gcacatattattcaagtacttaccagaggacttccgaaagaagcgatgcaagatactgtacgttctgagaaatccgaagg acgtagcggtgtcttattacaaccatcattctaagataaaggagtacgagtatgacggcaaatgggaaccatatcttgac cgttatatagagggaaacgttgactatggttcttggtttgactatacagtggattgggaacgtgtaatgaaggaggaccc agagtatccagtccatgtgatgtattacgaggatatgaaggagaatggtatgagagaaatacaaagacttgctaaattct tagaagttgatagagacgagaaattcatcagggaagtagatgaactctgccagtttgacagaatgaagaaagacaaggac aaaatagaaaacgcagacgagtggaaaaatggacaacctgggatgtatcgtaaaggtcaggtgggcgactggaaaaactg gttcaccgttagtcagagtgagaaattcgatgtcatttacgatgagaagatgaaaaattccaacgtcaagatacgattta caatatga |
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Protein
| Protein ID | pfu_aug1.0_109.1_22000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_22000.t1 MPEVKLTDKSGATITALDIDNGYIIPTFKALENHEQHVLSMPTWNAENDDILICAYPKSGTHWLWEVTCMLLKGKAERIK RVKEDVMIEGMTKDRYEKEPVPRVFNTHILFKYLPEDFRKKRCKILYVLRNPKDVAVSYYNHHSKIKEYEYDGKWEPYLD RYIEGNVDYGSWFDYTVDWERVMKEDPEYPVHVMYYEDMKENGMREIQRLAKFLEVDRDEKFIREVDELCQFDRMKKDKD KIENADEWKNGQPGMYRKGQVGDWKNWFTVSQSEKFDVIYDEKMKNSNVKIRFTI |
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