Gene
| Gene Model ID | pfu_aug1.0_109.1_22002 |
|---|---|
| Locus | scaffold109.1 : 41340 ... 44935 : - |
| To GenomeBrowser | scaffold109.1:41340..44935 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug2.0_77.1_23401 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_109.1_22002.t1 | 2 | 1 | HlyIII | 54 | 273 | 4.1e-30 | 104.8 | 2.8e-34 | 4.1e-30 | 104.8 |
| pfu_aug1.0_109.1_22002.t1 | 2 | 2 | HlyIII | 301 | 318 | 4.1e-30 | 104.8 | 0.51 | 7600.0 | -4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_109.1_22002.t1 | gi|34330174|ref|NP_899188.1| | membrane progestin receptor alpha-B [Danio rerio] | 1.96182e-44 |
Transcript
| Transcript ID | pfu_aug1.0_109.1_22002.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_22002.t1 atgatgcgattacttcccttggatcggtttctctttcccgctgcagaaaatcagcagacgttacatgtttccaaggtgcc acgtgcgcttcatgagcccgccatattaggcgggtatcgaccaatcaacaaaccttggagatattatttcgccagcatct tccatattcacaacgaaactgtcaacgtttggacacatttagtagcgacaattgtactgattctggtgcttctagattgt atctcggactacggtagtggtaacaaacatttatggccaatggtaatctttctactcacgtgcatttgcacatgtctagt cagttcgctggttcatcttcttcattccaagtcaacagacatccattattgtgctttcatgatagattacattggggtga acacctatgcttttgggaccggagtcattgcattctactcatgttcagacgaagaaacgtataattatttaggaacatac tacatgccaattttaactatcgctacgtggttcaactacatcacattttgttctgcaaagctattatacggagaaaatcc atatagtatgaggaaaaagctgatttatataaccggcactttgattctggcagtatttctcagtgcaccttttgcatcca ggtactggaattgtttccgctcatcagagtgttcgatgagttccttgaatcacgtgaccctttgctttccactcttcata atcgaagcgttctttttcgggagtcatatccctgaaaaattgataccaggaaagtgtgatatcataggtcaaggtcacca aatatttcatgttatatccacaatcacccagcttatgcaaatccgagctgtccgaatcgactatacaattggtgcgtccg accacactcatccccatttagctcatctctcaggggctacattcgccgtcatatttctcaatgcattgactttcctgtat ttcaagaaattaattggcaagaagcaaaccaagaattattga |
|
Protein
| Protein ID | pfu_aug1.0_109.1_22002.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_109.1_22002.t1 MMRLLPLDRFLFPAAENQQTLHVSKVPRALHEPAILGGYRPINKPWRYYFASIFHIHNETVNVWTHLVATIVLILVLLDC ISDYGSGNKHLWPMVIFLLTCICTCLVSSLVHLLHSKSTDIHYCAFMIDYIGVNTYAFGTGVIAFYSCSDEETYNYLGTY YMPILTIATWFNYITFCSAKLLYGENPYSMRKKLIYITGTLILAVFLSAPFASRYWNCFRSSECSMSSLNHVTLCFPLFI IEAFFFGSHIPEKLIPGKCDIIGQGHQIFHVISTITQLMQIRAVRIDYTIGASDHTHPHLAHLSGATFAVIFLNALTFLY FKKLIGKKQTKNY |
|