Gene
| Gene Model ID | pfu_aug1.0_10930.1_68261 |
|---|---|
| Locus | scaffold10930.1 : 6966 ... 8737 : + |
| To GenomeBrowser | scaffold10930.1:6966..8737 |
| Genes list of scaffold | scaffold10930.1 |
| Synonym | pfu_aug2.0_1490.1_01664 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10930.1_68261.t1 | 2 | 1 | DDE_Tnp_4 | 92 | 128 | 4.2039e-45 | 153.3 | 0.87 | 6500.0 | -3.5 |
| pfu_aug1.0_10930.1_68261.t1 | 1 | 1 | HTH_Tnp_4 | 95 | 147 | 4.7e-14 | 51.6 | 1.1e-17 | 8.2e-14 | 50.8 |
| pfu_aug1.0_10930.1_68261.t1 | 2 | 2 | DDE_Tnp_4 | 177 | 344 | 4.2039e-45 | 153.3 | 0.0 | 7.00649e-45 | 152.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10930.1_68261.t1 | gi|156385321|ref|XP_001633579.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_10930.1_68261.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10930.1_68261.t1 atggaaacagatatacaagaaacaagtaatccgccctctgatgagacagttaatcatccgccaagtaaagaagtgcaaac aggactaacacgggaccatattcaacagttagaggatgacaataaagctaaacttttcacaagttctgtgcctactaaag gaatatatagcttctcgtactacgagaatgatccagaaagagtgagcttttatacaggattgccaaacattgcagttttg aggctagtgttccatttcatcatgtacttcatgtctgacaataagttgctttccaaggaacaggagtttctattgtgcct tgtgaaattgagactggattatcttttcaaagatattgcgtacagtcttgatgtttcgctttctacggtacagagaagtt tccatgatacactggatctgatgtatgttagactctcttttttagtgaaatggccatctcgagagacattacgaacatca atgccaatgagttttcgcaaagattttggacagaaggtgtgtgttgtactagactgctttaaactttttacagaaagacc aagtggctccttgaacaaagtgtacacatattccaactataagcagcatcaaactgtgaaatacttgattggaatagctc cacagggtgtcattactttcatatctgaaggctggggagggagaacttctgacaaattcattactgagaagtctggaatt ctacaaaacctacctgaagacatagtgatgagagatagagggttctgcattgaggaaagtgtgcatttctacggtgcaga actagccataccaaatttcaccagaggaaagtcacagttgcatcccttagaagttgagaaaactagacgcattgcttcag tacgaattcatgttgagagagtaataggacttgttctgcgtaagtttagaatttttgatggcattattccccttgaattt gtcaaactgcgtaatggatctgaagtaccgaccattgacaagatagtgaaggttgcctgttgtttgactaacttgtgcgc atctgtggtaccatttgaccagtaa |
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Protein
| Protein ID | pfu_aug1.0_10930.1_68261.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10930.1_68261.t1 METDIQETSNPPSDETVNHPPSKEVQTGLTRDHIQQLEDDNKAKLFTSSVPTKGIYSFSYYENDPERVSFYTGLPNIAVL RLVFHFIMYFMSDNKLLSKEQEFLLCLVKLRLDYLFKDIAYSLDVSLSTVQRSFHDTLDLMYVRLSFLVKWPSRETLRTS MPMSFRKDFGQKVCVVLDCFKLFTERPSGSLNKVYTYSNYKQHQTVKYLIGIAPQGVITFISEGWGGRTSDKFITEKSGI LQNLPEDIVMRDRGFCIEESVHFYGAELAIPNFTRGKSQLHPLEVEKTRRIASVRIHVERVIGLVLRKFRIFDGIIPLEF VKLRNGSEVPTIDKIVKVACCLTNLCASVVPFDQ |
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