Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1098.1_65796
Locus scaffold1098.1 : 9846 ... 18166 : +
To GenomeBrowser scaffold1098.1:9846..18166
Genes list of scaffold scaffold1098.1
Synonym pfu_aug2.0_645.1_17686

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1098.1_65796.t1 gi|291220749|ref|XP_002730392.1| 1.0e-36

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_1098.1_65796.t1
Definition-
>pfu_aug1.0_1098.1_65796.t1
atgatactagattcaggagaaatagtgatgaacaaatggacaaattttactattgattatctggacactatcagaggctt
agctattgattctgtaccggtaattatcggaaccatcaaagttttaaaaatgatgtttaaaaccagtgaaataccattca
tgctgtgttcttttatacatctacgcacactgcaaatgcatgaaacagtgacacacagtgacactcttcatatacatcct
gccattccaccattttctacgaggaagaagcatcagagtcggcggcgggagccccctcagggagcctcgtctaacacagt
cgggtacaatgactcgctagggtttcagtatacagactcagaacaacatggcttcaaagttccacaaggtctgccgccta
aatctgccaggaggcagcacgatgatggaaaagtcagtagtagtgtagatcgtagctatacagggaaggacagggatggg
agtgatcaaacaataggctgggacaatagttctcctcagggtgacaaacaaggcaaaggattccgtgctcagaacaacat
ggtgcagaatgtatacgaaactccatgtaacggtattctaggtgactctggatttggtacagatagtagtggaaaacgct
cggaaagaaaagtgccaggttccgatggcagccatgttgtctcaagggaaagcactcttgccaatacagcagctggagac
aataccaatgagtcagcaggtcaaaggcaaaggtcaaggtcacagactggcagagaggtgaacatgattggaccatttct
gactgatggtggtcgaagaagttttgattcgggccagtattctaacatggagaagctgtcgtcacctgggaatgcaagga
aatctaaaagtccctcagagagtaaaatggtagatcacagtgacctagataagacaatgatgcagaagcagagacacgag
atacagttactgatccaggagctgaaggacagggatcgtgaacttaacgacatgatgacggcacatcaacaacaactagt
ggcatgggaacaggatagacataggatactcacactggaacagagactggctaaaactgaagaggattatcagtacagga
cccagcagttacgtactgccatgtctaaacttaaagctttccgtaacgagagtctatcccataattccacactagagacg
acacaagaacagctgaccaagttatgtcaggagaataattcttactcagtacagatacaagacatggaggagaaaacgag
aaaacttgaggagcatgttaaggaactgaattccacagttggacagttacgtgccagagatcaggaactgtgtactgtac
taaaactcaaagaaaaagacatctcctcagctactgtgcacatgaaggaaatgaatgagagactgcagcagctggacagg
agaaataaagaatgccaggatagagagaatgaagcagtcaaacaagccaatcactggagagaaaagtttttagattcaaa
gaaggaacttgagtcatgtacagaaaaggtgcccaagttctga

Protein
Protein IDpfu_aug1.0_1098.1_65796.t1
Definition-
>pfu_aug1.0_1098.1_65796.t1
MILDSGEIVMNKWTNFTIDYLDTIRGLAIDSVPVIIGTIKVLKMMFKTSEIPFMLCSFIHLRTLQMHETVTHSDTLHIHP
AIPPFSTRKKHQSRRREPPQGASSNTVGYNDSLGFQYTDSEQHGFKVPQGLPPKSARRQHDDGKVSSSVDRSYTGKDRDG
SDQTIGWDNSSPQGDKQGKGFRAQNNMVQNVYETPCNGILGDSGFGTDSSGKRSERKVPGSDGSHVVSRESTLANTAAGD
NTNESAGQRQRSRSQTGREVNMIGPFLTDGGRRSFDSGQYSNMEKLSSPGNARKSKSPSESKMVDHSDLDKTMMQKQRHE
IQLLIQELKDRDRELNDMMTAHQQQLVAWEQDRHRILTLEQRLAKTEEDYQYRTQQLRTAMSKLKAFRNESLSHNSTLET
TQEQLTKLCQENNSYSVQIQDMEEKTRKLEEHVKELNSTVGQLRARDQELCTVLKLKEKDISSATVHMKEMNERLQQLDR
RNKECQDRENEAVKQANHWREKFLDSKKELESCTEKVPKF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495