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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1099.1_00611
Locus scaffold1099.1 : 37418 ... 39495 : -
To GenomeBrowser scaffold1099.1:37418..39495
Genes list of scaffold scaffold1099.1
Synonym pfu_aug2.0_990.1_01306

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1099.1_00611.t1 1 1 7tm_1 41 289 6.9e-22 77.8 6.3e-26 9.4e-22 77.3

Transcript
Transcript IDpfu_aug1.0_1099.1_00611.t1
Definition-
>pfu_aug1.0_1099.1_00611.t1
atggaagcgtttccaatatggttccgaatcgtgtcaccaatattattcataacagaaagtatctgcgggatttgccttaa
cctcactgtgattacttccggagcaaagcgacctcgaggctccaatttcactatcttgcttagtcgggttgacctaatta
tgtctgtagttgtgataccactaacattattgacagtattgctacctccagacacaagcttcatcctttgtgtaatacga
gaatccgctatgacggcagggacagttgccacctttgcaacgcttatctgtgtgagccttgacagatattacaccatagt
gctacctccaaatgctctactacaatcaagaataatcaaagttttccacattttggtttgggtttttgccgctatcggtg
tttgccttccgtttttctctctattgagactaccttttcaagacacaaaaattgttctatcttgcagggaccacttaatt
cacctcgatccgaacaatatgtatgagttttactccttgctattttacattatggcatcagcttccatcattgaatgtta
tttagctatcatcaatgtcgccagattaaggaaccaatactcggagcagcgtgcccgaaaaggtatcaaacgaggaatca
agcagaacaaagaaagtgatttccaagtatacatctgtaggaaaaggacattcaggaccatcattctctcagtgatgtct
atatgcgccgttgtgttatgttggggaccctacataatactttcagttgtagttgttttcactggaacttcgcctgtcct
caacatattgaagacgaccgcgtgtttactggcgttgtcttctgtgatatggaacccacttctttactcatttttaccga
aagaatcaggccgcgtcaacaccataaggcgtactccaaattataagagacctgctacaacatgtgccaagagtgagaca
gacatcgaagcgacattggaacagcgaacgaaacctatgacgctcttgtcgcctccaaactgggtaagccccatgccgag
cgcatcatcttcatccactttattcccatcgtcttcatcgttccctacatcttcttcgtcgttaaaaccacaagggtctg
cctcacccatgccatctacatcaacagagttatcgttcataaatagttcctttcaagaagtggaaatacacaaaacagac
tgtaccactgtatcttacattgcagtacaggaatatcgtcacaaatcaactgaaatttaa

Protein
Protein IDpfu_aug1.0_1099.1_00611.t1
Definition-
>pfu_aug1.0_1099.1_00611.t1
MEAFPIWFRIVSPILFITESICGICLNLTVITSGAKRPRGSNFTILLSRVDLIMSVVVIPLTLLTVLLPPDTSFILCVIR
ESAMTAGTVATFATLICVSLDRYYTIVLPPNALLQSRIIKVFHILVWVFAAIGVCLPFFSLLRLPFQDTKIVLSCRDHLI
HLDPNNMYEFYSLLFYIMASASIIECYLAIINVARLRNQYSEQRARKGIKRGIKQNKESDFQVYICRKRTFRTIILSVMS
ICAVVLCWGPYIILSVVVVFTGTSPVLNILKTTACLLALSSVIWNPLLYSFLPKESGRVNTIRRTPNYKRPATTCAKSET
DIEATLEQRTKPMTLLSPPNWVSPMPSASSSSTLFPSSSSFPTSSSSLKPQGSASPMPSTSTELSFINSSFQEVEIHKTD
CTTVSYIAVQEYRHKSTEI

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