Gene
| Gene Model ID | pfu_aug1.0_10993.1_17708 |
|---|---|
| Locus | scaffold10993.1 : 43136 ... 50175 : - |
| To GenomeBrowser | scaffold10993.1:43136..50175 |
| Genes list of scaffold | scaffold10993.1 |
| Synonym | pfu_aug2.0_231.1_03852 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10993.1_17708.t1 | 1 | 1 | Ist1 | 12 | 177 | 0.0 | 202.6 | 0.0 | 0.0 | 202.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10993.1_17708.t1 | gi|260834775|ref|XP_002612385.1| | hypothetical protein BRAFLDRAFT_280125 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_10993.1_17708.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10993.1_17708.t1 atgttcagcagcggtccaaatctcaataaactgaaaacaaatttgcgattggtaataaatcgcttgaaattgttggaaaa gaagaaaacggaaatggcaaataagtcaagaaaggagatcgcagattacatttcaaatgggaaagatgacagggcacgga tcagagtggaacacatcatacgtgaagattacttagtagaagccatggagctgttggagatgtattgtgatctgttactg gctagatttggcctgatacagactcaaaaggagttagaccctggactggaagaagctatagctagtatcatctgggcaac acccagattacaagcagatgttcaagagtttaaagtggtatcagaccaactgatagctaaatatggtaaagaattcggtc aggcttgcagaacgaatgaacttaacaatgtcaatgagaagatgatgcataagttaggagtccaggcacccccaaagatt ctgatagagaagtatatggcagagatagccattgtatacaaagtgccgtttgaaccagatcagtctattatggcccagga cgaagttgatttagcagagaacatgctgatagatcttggagacaagaaaggaggaggaagtagtgggggacctggagggg gaattctacagccaataaatggaggtgcctcagcagcaggctgttatcccccaccacaggccccagcatccaactatcca caggccccatctggctatccaacacctcagggaccctccactgcatatcccccaccccaaggggcgtatcctcctccagg acaatatcagccatctcagatgagtgataggaaggtccccccagtcctacccaatgcccctccagttggaggtataggag cagggtgttttgttgaccccacccagcctcccccaccatcacagggcaagcagtcatatgatgactggctaggagttgat cccaagaaacaagtaaacaatgcccctcctgccccaggattcaccaacctccctgacctacctgctgtacctaccaatac attacctgatcctgggaactccgtgggcggggaatcagcaggaggggatgatgtggactttgatgacctcacgagaaggt tcgaacaactcaaaaagaaaaagtga |
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Protein
| Protein ID | pfu_aug1.0_10993.1_17708.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10993.1_17708.t1 MFSSGPNLNKLKTNLRLVINRLKLLEKKKTEMANKSRKEIADYISNGKDDRARIRVEHIIREDYLVEAMELLEMYCDLLL ARFGLIQTQKELDPGLEEAIASIIWATPRLQADVQEFKVVSDQLIAKYGKEFGQACRTNELNNVNEKMMHKLGVQAPPKI LIEKYMAEIAIVYKVPFEPDQSIMAQDEVDLAENMLIDLGDKKGGGSSGGPGGGILQPINGGASAAGCYPPPQAPASNYP QAPSGYPTPQGPSTAYPPPQGAYPPPGQYQPSQMSDRKVPPVLPNAPPVGGIGAGCFVDPTQPPPPSQGKQSYDDWLGVD PKKQVNNAPPAPGFTNLPDLPAVPTNTLPDPGNSVGGESAGGDDVDFDDLTRRFEQLKKKK |
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