Gene
| Gene Model ID | pfu_aug1.0_10996.1_46299 |
|---|---|
| Locus | scaffold10996.1 : 17378 ... 47015 : - |
| To GenomeBrowser | scaffold10996.1:17378..47015 |
| Genes list of scaffold | scaffold10996.1 |
| Synonym | pfu_aug2.0_481.1_04244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10996.1_46299.t1 | 2 | 1 | Lectin_C | 52 | 171 | 8.4e-16 | 58.5 | 3.5e-17 | 5.2e-13 | 49.5 |
| pfu_aug1.0_10996.1_46299.t1 | 2 | 2 | Lectin_C | 198 | 220 | 8.4e-16 | 58.5 | 0.00088 | 13.0 | 6.4 |
Transcript
| Transcript ID | pfu_aug1.0_10996.1_46299.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10996.1_46299.t1 atgcgatacgctctgtttgtaatcgtgtgcctgtgtacgagcagtgttacagcccaattcgtgtccattgcacacggagc cctcaccaaatgttacacggaccaagctgcctgggctatagacgggtactgccttgagatagtcctaatcgaactgaact ggtacagcgccaggaattggtgcgcacatagaggaggagacctggcggaaatccgtacacagcctttacaagattctatt acgcaacatctgaggataagaaacgggggtaaaaatggattctggattggtgctacggatacagatcacgagggagtctg gcaatggctacattctccacgtcaaatgggttttactaattggagtccaggacaaggtccaaccgaccatggattcatat ttggtggatccctggaggactgtgctatgatccggactgatgagaactatgaatggcatgatggtccatgtgatggagtc atcgacagcttccattactccttcatttgtcaatatggtccaagaggcatgccctattcatattggaatccctctcaggg accaaatgatcacggatttttcattggtggatcacttgaggactgtgccatgataaggaccgacgatggttacagatggc atgatggtccatgtgatggacttattgataatctgtcatattccttcatatgtcagtatgccaattccaaaagcgacaac gataaagtggctgacacaaaaaccaacaacgcgcgtatggaaaacgcagaaaccaacgacttacgtatggacaacacaaa aaccaacgacttacgtttggataacaaacaaacctacgacatacgcatggacaacccaaaaaccaacaacaacgaccgcc tctggcataatcattggataaaatga |
|
Protein
| Protein ID | pfu_aug1.0_10996.1_46299.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10996.1_46299.t1 MRYALFVIVCLCTSSVTAQFVSIAHGALTKCYTDQAAWAIDGYCLEIVLIELNWYSARNWCAHRGGDLAEIRTQPLQDSI TQHLRIRNGGKNGFWIGATDTDHEGVWQWLHSPRQMGFTNWSPGQGPTDHGFIFGGSLEDCAMIRTDENYEWHDGPCDGV IDSFHYSFICQYGPRGMPYSYWNPSQGPNDHGFFIGGSLEDCAMIRTDDGYRWHDGPCDGLIDNLSYSFICQYANSKSDN DKVADTKTNNARMENAETNDLRMDNTKTNDLRLDNKQTYDIRMDNPKTNNNDRLWHNHWIK |
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